Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NUTF2P8-201ENST00000604593 363 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AC090115.4-201ENST00000609970 188 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AL359535.1-201ENST00000612100 1087 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AP004607.9-201ENST00000618202 316 ntBASIC2.21□□□□□ -2.06
HIST1H1AQ02539 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.21□□□□□ -2.06
HIST1H1AQ02539 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 RNU1-35P-201ENST00000362782 153 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 RNU6-167P-201ENST00000384292 106 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL162389.1-201ENST00000449233 177 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC117440.1-201ENST00000474107 571 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 RPS3AP43-201ENST00000479743 781 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC026412.2-201ENST00000512270 1075 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC108043.1-201ENST00000512696 574 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 SNORA31.20-201ENST00000517111 133 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 CCNG2P1-201ENST00000549521 1000 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 COX6CP3-201ENST00000580869 223 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 BNIP3P11-201ENST00000603878 563 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AL162574.2-201ENST00000614618 657 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC140725.3-201ENST00000616193 880 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC018755.4-201ENST00000619715 454 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC139713.2-210ENST00000641741 992 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HIST1H1AQ02539 AC087565.3-202ENST00000642085 1603 ntBASIC2.2□□□□□ -2.06
HIST1H1AQ02539 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL672167.1-206ENST00000356293 943 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 SNORA63.1-201ENST00000362493 131 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 SNORA71.3-201ENST00000362582 128 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 RNU1-85P-201ENST00000364127 164 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 SNORA9.2-201ENST00000365361 133 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 ANAPC10P1-201ENST00000395991 556 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 U3.42-201ENST00000408746 214 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL513477.1-202ENST00000417061 214 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL645937.1-202ENST00000421799 937 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 UBE2D3P2-201ENST00000424409 445 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL445528.1-201ENST00000426330 420 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 snoU13.4-201ENST00000458916 104 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL672167.3-201ENST00000465951 960 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 RN7SL807P-201ENST00000470923 297 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC006445.1-201ENST00000491925 405 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL358832.1-201ENST00000497800 389 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 DYNLL1P6-201ENST00000503440 264 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MTND3P24-201ENST00000506306 329 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 TBCAP3-201ENST00000512475 312 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 RN7SKP40-201ENST00000517211 242 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MIR5004-201ENST00000579078 107 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MIR1254-2-201ENST00000579553 63 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC010620.2-201ENST00000600135 313 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC015871.2-201ENST00000603605 948 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC106791.2-201ENST00000604680 391 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL159169.3-201ENST00000608871 561 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AC084036.1-201ENST00000609190 508 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MIR6075-201ENST00000620782 95 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MTND5P1-201ENST00000445440 1375 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HIST1H1AQ02539 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 MAPK10-266ENST00000641066 6555 ntBASIC2.19□□□□□ -2.06
HIST1H1AQ02539 AL645568.2-201ENST00000432815 1337 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms