Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TAF13P2-201ENST00000416876 286 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL513175.1-201ENST00000431492 780 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 RPL7P52-201ENST00000449200 742 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 Z99714.1-201ENST00000450463 807 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 RPL21P104-201ENST00000464143 478 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AP002884.2-201ENST00000471647 395 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC016550.1-201ENST00000505348 785 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC124293.1-201ENST00000530034 493 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC006518.2-201ENST00000542513 940 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 NIFKP8-201ENST00000560500 874 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC074050.1-201ENST00000563247 211 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 MTCO1P40-201ENST00000574371 625 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AP002906.1-201ENST00000603405 233 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 PRELID3BP8-201ENST00000604148 295 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 IGHV3-29-201ENST00000604817 344 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL159169.3-201ENST00000608871 561 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL450489.1-201ENST00000612071 468 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AP000943.4-201ENST00000622912 357 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 AC093875.1-201ENST00000623688 504 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCS1Q01581 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HMGCS1Q01581 AL136164.4-201ENST00000625013 2135 ntBASIC3.01□□□□□ -1.93
HMGCS1Q01581 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 MTND5P1-201ENST00000445440 1375 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 ZNF37BP-203ENST00000452306 1352 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 MTND4P34-201ENST00000572715 1371 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS1Q01581 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HMGCS1Q01581 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 AL136520.1-201ENST00000600311 1322 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AP001350.1-201ENST00000601906 1524 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3□□□□□ -1.93
HMGCS1Q01581 OR1S2-201ENST00000302592 978 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RNU6-1151P-201ENST00000384684 107 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RPL21P3-201ENST00000395517 478 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 DSTNP4-201ENST00000399472 474 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC110754.1-201ENST00000399740 601 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS1Q01581 AC069282.1-201ENST00000411911 526 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC092638.1-201ENST00000411966 1275 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 RPL21P66-201ENST00000426566 466 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 TRIAP1P1-201ENST00000427062 225 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 UBE2V1P1-201ENST00000430836 445 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3□□□□□ -1.93
HMGCS1Q01581 Z75741.1-201ENST00000446793 314 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AL050341.1-201ENST00000447743 313 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 UQCRHP3-201ENST00000451503 251 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 ELOCP23-201ENST00000452014 332 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RPS15AP1-201ENST00000457423 391 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC146507.2-201ENST00000460608 476 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RN7SL75P-201ENST00000461926 281 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RPS17P11-201ENST00000474297 293 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 RPS27AP1-201ENST00000475545 471 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC104629.1-201ENST00000494226 508 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS1Q01581 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 AC110794.1-201ENST00000505816 425 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS1Q01581 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
HMGCS1Q01581 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS1Q01581 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 AP003066.2-201ENST00000529375 555 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3□□□□□ -1.93
HMGCS1Q01581 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3□□□□□ -1.93
HMGCS1Q01581 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS1Q01581 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3□□□□□ -1.93
HMGCS1Q01581 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3□□□□□ -1.93
HMGCS1Q01581 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 AC018926.1-201ENST00000616335 435 ntBASIC3□□□□□ -1.93
HMGCS1Q01581 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HMGCS1Q01581 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms