Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC078899.3-201ENST00000599065 212 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AC096947.1-201ENST00000603233 470 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 ATP5A1P2-202ENST00000616464 443 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 AP001002.2-201ENST00000625137 386 ntBASIC2.6□□□□□ -1.99
H3F3AP84243 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
H3F3AP84243 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3F3AP84243 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3F3AP84243 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
H3F3AP84243 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.59□□□□□ -1.99
H3F3AP84243 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
H3F3AP84243 AP003122.5-201ENST00000527668 3766 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.59□□□□□ -1.99
H3F3AP84243 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
H3F3AP84243 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.59□□□□□ -1.99
H3F3AP84243 RNU6-891P-201ENST00000384280 111 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 RPS3AP26-201ENST00000398259 784 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 MIR1303-201ENST00000408625 86 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 RNU4-65P-201ENST00000410473 140 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC104332.2-201ENST00000429959 156 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AL139132.1-201ENST00000431587 344 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.59□□□□□ -1.99
H3F3AP84243 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 RPL37P4-201ENST00000448908 268 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AL445669.2-201ENST00000454425 421 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC126121.1-201ENST00000482313 553 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC004062.1-201ENST00000509926 645 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC010374.2-201ENST00000512933 535 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC104986.1-201ENST00000517978 436 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.59□□□□□ -1.99
H3F3AP84243 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.59□□□□□ -1.99
H3F3AP84243 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.59□□□□□ -1.99
H3F3AP84243 AC012119.1-201ENST00000603184 222 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC131902.3-201ENST00000611767 581 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AL110115.1-201ENST00000614396 364 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 AC020923.1-201ENST00000624021 917 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.59□□□□□ -1.99
H3F3AP84243 MAPK10-322ENST00000641485 4530 ntBASIC2.59□□□□□ -1.99
H3F3AP84243 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 ZNF833P-201ENST00000424938 1494 ntBASIC2.58□□□□□ -2
H3F3AP84243 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.58□□□□□ -2
H3F3AP84243 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.58□□□□□ -2
H3F3AP84243 RNU1-35P-201ENST00000362782 153 ntBASIC2.58□□□□□ -2
H3F3AP84243 MIR421-201ENST00000365696 85 ntBASIC2.58□□□□□ -2
H3F3AP84243 CD24P4-201ENST00000382840 243 ntBASIC2.58□□□□□ -2
H3F3AP84243 RNU6-761P-201ENST00000384148 107 ntBASIC2.58□□□□□ -2
H3F3AP84243 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
H3F3AP84243 UBA52P6-201ENST00000399822 382 ntBASIC2.58□□□□□ -2
H3F3AP84243 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
H3F3AP84243 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.58□□□□□ -2
H3F3AP84243 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.58□□□□□ -2
H3F3AP84243 RPL23AP83-201ENST00000434984 473 ntBASIC2.58□□□□□ -2
H3F3AP84243 CYCSP32-201ENST00000440548 321 ntBASIC2.58□□□□□ -2
H3F3AP84243 AL592437.1-201ENST00000443781 492 ntBASIC2.58□□□□□ -2
H3F3AP84243 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 RPS29P26-201ENST00000477483 171 ntBASIC2.58□□□□□ -2
H3F3AP84243 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
H3F3AP84243 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.58□□□□□ -2
H3F3AP84243 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
H3F3AP84243 SCARNA13-201ENST00000516672 275 ntBASIC2.58□□□□□ -2
H3F3AP84243 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
H3F3AP84243 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.58□□□□□ -2
H3F3AP84243 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.58□□□□□ -2
H3F3AP84243 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.58□□□□□ -2
H3F3AP84243 AC017100.2-201ENST00000584628 355 ntBASIC2.58□□□□□ -2
H3F3AP84243 AP001029.3-201ENST00000588063 596 ntBASIC2.58□□□□□ -2
H3F3AP84243 NTAN1P1-201ENST00000603150 646 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC090115.4-201ENST00000609970 188 ntBASIC2.58□□□□□ -2
H3F3AP84243 AL359198.2-201ENST00000611836 194 ntBASIC2.58□□□□□ -2
H3F3AP84243 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.58□□□□□ -2
H3F3AP84243 Z99129.2-201ENST00000619967 314 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC010338.1-201ENST00000621823 717 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC006111.3-201ENST00000622137 383 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC091953.5-201ENST00000622919 233 ntBASIC2.58□□□□□ -2
H3F3AP84243 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
H3F3AP84243 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 SAGE4P-201ENST00000442271 3381 ntBASIC2.58□□□□□ -2
H3F3AP84243 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
H3F3AP84243 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
H3F3AP84243 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.57□□□□□ -2
H3F3AP84243 RNU6-263P-201ENST00000363811 107 ntBASIC2.57□□□□□ -2
H3F3AP84243 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
H3F3AP84243 EEF1A1P41-201ENST00000414667 207 ntBASIC2.57□□□□□ -2
H3F3AP84243 AC233728.2-201ENST00000425348 757 ntBASIC2.57□□□□□ -2
H3F3AP84243 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.57□□□□□ -2
H3F3AP84243 RPL7P29-201ENST00000437151 728 ntBASIC2.57□□□□□ -2
H3F3AP84243 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.57□□□□□ -2
H3F3AP84243 RPS29P6-201ENST00000438196 145 ntBASIC2.57□□□□□ -2
H3F3AP84243 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
H3F3AP84243 NANOGNBP1-201ENST00000448444 480 ntBASIC2.57□□□□□ -2
H3F3AP84243 GSTA11P-201ENST00000452866 669 ntBASIC2.57□□□□□ -2
H3F3AP84243 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
H3F3AP84243 AL136126.1-201ENST00000473603 402 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms