Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 RNU4-78P-201ENST00000410940 126 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.54□□□□□ -2
HIST1H3AP68431 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H3AP68431 SAR1AP4-201ENST00000429225 591 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H3AP68431 SNRPEP4-201ENST00000435815 279 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H3AP68431 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H3AP68431 RPL37P4-201ENST00000448908 268 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 CIR1P1-201ENST00000524055 1133 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.54□□□□□ -2
HIST1H3AP68431 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H3AP68431 SERPINE4P-201ENST00000554978 281 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 H3F3AP1-201ENST00000559984 334 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 MIR3944-201ENST00000581277 108 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AC083760.1-201ENST00000589621 670 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H3AP68431 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H3AP68431 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.54□□□□□ -2
HIST1H3AP68431 AC012119.1-201ENST00000603184 222 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AC007179.3-201ENST00000604976 235 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AL392048.1-201ENST00000613946 534 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 CYCSP41-201ENST00000616920 296 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AC002076.2-201ENST00000617362 122 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 AC091953.5-201ENST00000622919 233 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.54□□□□□ -2
HIST1H3AP68431 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
HIST1H3AP68431 ZNF807-201ENST00000328088 1707 ntBASIC2.54□□□□□ -2
HIST1H3AP68431 MTND5P28-201ENST00000438005 1594 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H3AP68431 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
HIST1H3AP68431 MIR422A-201ENST00000362286 90 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 SNORA14A-201ENST00000364773 135 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H3AP68431 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.53□□□□□ -2
HIST1H3AP68431 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H3AP68431 Z85994.2-201ENST00000434327 452 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 YWHAZP8-201ENST00000436935 731 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 RPL23AP58-201ENST00000440453 469 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H3AP68431 RSL24D1P2-201ENST00000445584 366 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 OR6K1P-201ENST00000456766 971 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 snoU13.3-201ENST00000459441 104 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 SUMO1P1-201ENST00000497904 306 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.53□□□□□ -2
HIST1H3AP68431 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.53□□□□□ -2
HIST1H3AP68431 AC025459.1-201ENST00000504072 156 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC111000.2-201ENST00000507775 550 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H3AP68431 AC098799.2-201ENST00000509466 868 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 HMGB1P47-201ENST00000511281 589 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 SNORA31.1-201ENST00000515993 133 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 RNU6-491P-201ENST00000516099 110 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 SNORA31.5-201ENST00000516190 133 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC009812.2-201ENST00000517657 457 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H3AP68431 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.53□□□□□ -2
HIST1H3AP68431 FAM60DP-201ENST00000524174 632 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H3AP68431 MIR92B-201ENST00000607575 96 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 VIS1.1-201ENST00000610517 203 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AL020991.1-201ENST00000612314 373 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H3AP68431 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.53□□□□□ -2
HIST1H3AP68431 AL355493.4-201ENST00000618530 292 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC018755.4-201ENST00000619715 454 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 AC022509.4-201ENST00000621404 572 ntBASIC2.53□□□□□ -2
HIST1H3AP68431 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HIST1H3AP68431 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H3AP68431 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H3AP68431 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2.01
HIST1H3AP68431 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H3AP68431 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H3AP68431 MIR512-1-201ENST00000384913 84 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 MIR181B1-201ENST00000385240 110 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 MT-TC-201ENST00000387405 66 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 SNORA11-201ENST00000408789 128 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 RAD23BP2-201ENST00000416003 1207 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 SSXP9-201ENST00000417503 292 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 ATG3P1-201ENST00000419507 911 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 USP9YP36-201ENST00000424581 829 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 GSTA11P-201ENST00000452866 669 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 AP002345.1-201ENST00000456493 928 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC008571.1-201ENST00000467232 300 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC083906.5-201ENST00000503722 328 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
HIST1H3AP68431 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H3AP68431 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms