Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL445529.1-201ENST00000398713 389 ntBASIC2.37□□□□□ -2.03
UBA52P62987 RPS4XP8-201ENST00000402039 771 ntBASIC2.37□□□□□ -2.03
UBA52P62987 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AC005189.1-201ENST00000431286 310 ntBASIC2.37□□□□□ -2.03
UBA52P62987 RPS20P5-201ENST00000434808 360 ntBASIC2.37□□□□□ -2.03
UBA52P62987 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 RPL7P52-201ENST00000449200 742 ntBASIC2.37□□□□□ -2.03
UBA52P62987 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.37□□□□□ -2.03
UBA52P62987 AC008481.1-201ENST00000463278 396 ntBASIC2.37□□□□□ -2.03
UBA52P62987 HMGB1P3-201ENST00000502802 616 ntBASIC2.37□□□□□ -2.03
UBA52P62987 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AC017037.2-201ENST00000513850 890 ntBASIC2.37□□□□□ -2.03
UBA52P62987 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
UBA52P62987 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.37□□□□□ -2.03
UBA52P62987 AL035413.2-201ENST00000604801 525 ntBASIC2.37□□□□□ -2.03
UBA52P62987 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
UBA52P62987 CR381653.2-201ENST00000624041 768 ntBASIC2.37□□□□□ -2.03
UBA52P62987 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.37□□□□□ -2.03
UBA52P62987 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.37□□□□□ -2.03
UBA52P62987 AC096644.4-201ENST00000563417 2912 ntBASIC2.37□□□□□ -2.03
UBA52P62987 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
UBA52P62987 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
UBA52P62987 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
UBA52P62987 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBA52P62987 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBA52P62987 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
UBA52P62987 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.36□□□□□ -2.03
UBA52P62987 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBA52P62987 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.36□□□□□ -2.03
UBA52P62987 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
UBA52P62987 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.36□□□□□ -2.03
UBA52P62987 SNORA18.3-201ENST00000384122 132 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC063976.3-201ENST00000426849 329 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC087499.2-201ENST00000432861 149 ntBASIC2.36□□□□□ -2.03
UBA52P62987 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBA52P62987 RAB28P3-201ENST00000448325 597 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC009961.3-201ENST00000449832 765 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AL109741.2-201ENST00000455561 343 ntBASIC2.36□□□□□ -2.03
UBA52P62987 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.36□□□□□ -2.03
UBA52P62987 SETP12-201ENST00000514068 805 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.36□□□□□ -2.03
UBA52P62987 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
UBA52P62987 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.36□□□□□ -2.03
UBA52P62987 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.36□□□□□ -2.03
UBA52P62987 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.36□□□□□ -2.03
UBA52P62987 AADACP1-206ENST00000561502 1193 ntBASIC2.36□□□□□ -2.03
UBA52P62987 MIR3945-201ENST00000581853 98 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC091057.2-201ENST00000602594 792 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC007619.2-201ENST00000605743 379 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AC006023.2-201ENST00000609916 167 ntBASIC2.36□□□□□ -2.03
UBA52P62987 AL355493.4-201ENST00000618530 292 ntBASIC2.36□□□□□ -2.03
UBA52P62987 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
UBA52P62987 AC139713.2-210ENST00000641741 992 ntBASIC2.36□□□□□ -2.03
UBA52P62987 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.36□□□□□ -2.03
UBA52P62987 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBA52P62987 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
UBA52P62987 AL359693.1-201ENST00000614959 2407 ntBASIC2.35□□□□□ -2.03
UBA52P62987 RNU6-600P-201ENST00000362524 99 ntBASIC2.35□□□□□ -2.03
UBA52P62987 SNORA51.2-201ENST00000364595 132 ntBASIC2.35□□□□□ -2.03
UBA52P62987 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
UBA52P62987 AL031679.1-201ENST00000400616 525 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AL355379.1-201ENST00000405542 640 ntBASIC2.35□□□□□ -2.03
UBA52P62987 RNA5SP181-201ENST00000410246 98 ntBASIC2.35□□□□□ -2.03
UBA52P62987 OOSP1P1-201ENST00000423265 274 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AC019097.1-201ENST00000424783 735 ntBASIC2.35□□□□□ -2.03
UBA52P62987 Z93242.1-201ENST00000427102 353 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 RPL21P112-201ENST00000434403 463 ntBASIC2.35□□□□□ -2.03
UBA52P62987 XKRYP6-201ENST00000440468 1116 ntBASIC2.35□□□□□ -2.03
UBA52P62987 XKRYP3-201ENST00000442113 1116 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.35□□□□□ -2.03
UBA52P62987 AL109933.2-201ENST00000452651 260 ntBASIC2.35□□□□□ -2.03
UBA52P62987 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.35□□□□□ -2.03
UBA52P62987 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.35□□□□□ -2.03
UBA52P62987 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
UBA52P62987 OR7K1P-201ENST00000546439 926 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.35□□□□□ -2.03
UBA52P62987 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.35□□□□□ -2.03
UBA52P62987 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
UBA52P62987 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 AC104984.5-201ENST00000586878 94 ntBASIC2.35□□□□□ -2.03
UBA52P62987 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.35□□□□□ -2.03
UBA52P62987 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.35□□□□□ -2.03
UBA52P62987 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.35□□□□□ -2.03
UBA52P62987 AL390240.1-201ENST00000612950 384 ntBASIC2.35□□□□□ -2.03
UBA52P62987 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.35□□□□□ -2.03
UBA52P62987 AP000676.4-201ENST00000624659 623 ntBASIC2.35□□□□□ -2.03
UBA52P62987 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.35□□□□□ -2.03
UBA52P62987 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
UBA52P62987 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.35□□□□□ -2.03
UBA52P62987 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.34□□□□□ -2.03
UBA52P62987 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
UBA52P62987 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms