Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORA35B-201ENST00000607417 129 ntBASIC1.5□□□□□ -2.17
RPL39P62891 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RPL39P62891 AC093591.3-201ENST00000634516 308 ntBASIC1.5□□□□□ -2.17
RPL39P62891 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.5□□□□□ -2.17
RPL39P62891 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
RPL39P62891 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.5□□□□□ -2.17
RPL39P62891 AC009313.2-201ENST00000417893 1941 ntBASIC1.5□□□□□ -2.17
RPL39P62891 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.5□□□□□ -2.17
RPL39P62891 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPL39P62891 DCAF13P1-201ENST00000495256 1330 ntBASIC1.49□□□□□ -2.17
RPL39P62891 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RPL39P62891 AL139276.1-201ENST00000311910 1001 ntBASIC1.49□□□□□ -2.17
RPL39P62891 OR56A5-201ENST00000340110 738 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC062016.1-201ENST00000355719 319 ntBASIC1.49□□□□□ -2.17
RPL39P62891 MTCO1P43-201ENST00000431831 488 ntBASIC1.49□□□□□ -2.17
RPL39P62891 ELOCP3-201ENST00000439303 348 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AL118520.1-201ENST00000450770 291 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL39P62891 RPS3P1-201ENST00000456781 192 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC079804.2-201ENST00000490376 200 ntBASIC1.49□□□□□ -2.17
RPL39P62891 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL39P62891 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL39P62891 RN7SKP40-201ENST00000517211 242 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RPL39P62891 AC121758.2-201ENST00000553271 193 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC053481.3-201ENST00000577881 843 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC010928.3-201ENST00000587712 541 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
RPL39P62891 AC024220.1-201ENST00000603675 484 ntBASIC1.49□□□□□ -2.17
RPL39P62891 MIR6132-201ENST00000622083 109 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.49□□□□□ -2.17
RPL39P62891 AC004777.1-201ENST00000624317 287 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL39P62891 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL39P62891 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPL39P62891 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL39P62891 MAPK10-322ENST00000641485 4530 ntBASIC1.49□□□□□ -2.17
RPL39P62891 AC073346.2-201ENST00000624724 2058 ntBASIC1.49□□□□□ -2.17
RPL39P62891 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL39P62891 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPL39P62891 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RPL39P62891 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
RPL39P62891 HSPE1P11-201ENST00000339579 310 ntBASIC1.48□□□□□ -2.17
RPL39P62891 RNU1-85P-201ENST00000364127 164 ntBASIC1.48□□□□□ -2.17
RPL39P62891 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 SNORA48.3-201ENST00000391081 134 ntBASIC1.48□□□□□ -2.17
RPL39P62891 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL39P62891 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 MORF4L1P7-201ENST00000426038 703 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AL513175.1-201ENST00000431492 780 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL39P62891 AL590664.1-201ENST00000448065 339 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 RN7SL432P-201ENST00000484057 298 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC025755.1-201ENST00000521306 278 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL39P62891 AC234775.3-201ENST00000564612 656 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC012182.1-201ENST00000570133 895 ntBASIC1.48□□□□□ -2.17
RPL39P62891 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL39P62891 RPS3AP23-202ENST00000574601 686 ntBASIC1.48□□□□□ -2.17
RPL39P62891 MIR4474-201ENST00000579189 78 ntBASIC1.48□□□□□ -2.17
RPL39P62891 MIR3944-201ENST00000581277 108 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC005229.3-201ENST00000603438 323 ntBASIC1.48□□□□□ -2.17
RPL39P62891 AC113368.1-201ENST00000603736 382 ntBASIC1.48□□□□□ -2.17
RPL39P62891 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.48□□□□□ -2.17
RPL39P62891 VN1R74P-201ENST00000613259 503 ntBASIC1.48□□□□□ -2.17
RPL39P62891 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.48□□□□□ -2.17
RPL39P62891 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL39P62891 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL39P62891 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RPL39P62891 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RPL39P62891 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.48□□□□□ -2.17
RPL39P62891 PABPC1P9-201ENST00000426076 1612 ntBASIC1.48□□□□□ -2.17
RPL39P62891 NACA3P-201ENST00000359690 648 ntBASIC1.47□□□□□ -2.17
RPL39P62891 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL39P62891 RPL17P12-201ENST00000413391 526 ntBASIC1.47□□□□□ -2.17
RPL39P62891 BX682237.1-201ENST00000415016 335 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.47□□□□□ -2.17
RPL39P62891 SUMO1P4-201ENST00000429430 302 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC092427.1-202ENST00000430569 476 ntBASIC1.47□□□□□ -2.17
RPL39P62891 HMGN2P20-201ENST00000437531 273 ntBASIC1.47□□□□□ -2.17
RPL39P62891 USP9YP8-201ENST00000441913 500 ntBASIC1.47□□□□□ -2.17
RPL39P62891 RPL21P133-201ENST00000443666 476 ntBASIC1.47□□□□□ -2.17
RPL39P62891 NPM1P49-201ENST00000448027 714 ntBASIC1.47□□□□□ -2.17
RPL39P62891 MORF4L1P4-201ENST00000450245 976 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC108938.1-201ENST00000451204 136 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AL109933.2-201ENST00000452651 260 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.47□□□□□ -2.17
RPL39P62891 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.47□□□□□ -2.17
RPL39P62891 RNA5SP200-201ENST00000516360 103 ntBASIC1.47□□□□□ -2.17
RPL39P62891 RNU2-58P-201ENST00000516403 183 ntBASIC1.47□□□□□ -2.17
RPL39P62891 RNA5SP281-201ENST00000516504 135 ntBASIC1.47□□□□□ -2.17
RPL39P62891 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.47□□□□□ -2.17
RPL39P62891 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL39P62891 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.47□□□□□ -2.17
RPL39P62891 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms