Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RPL23AP16-201ENST00000441715 421 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 RPS4XP4-201ENST00000443195 763 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.14□□□□□ -1.59
HERVK_113P62684 HSFY6P-201ENST00000445573 403 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC012671.1-201ENST00000451912 203 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.14□□□□□ -1.59
HERVK_113P62684 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 BX322784.1-201ENST00000455793 1077 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC069439.1-201ENST00000494739 167 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC021146.3-201ENST00000511911 260 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC010493.1-201ENST00000513479 292 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC114781.4-201ENST00000513707 639 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AP001893.2-201ENST00000526949 202 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 FAM92A1P1-201ENST00000528023 890 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 OR5AP1P-201ENST00000529730 940 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 OR8R1P-201ENST00000543943 764 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.14□□□□□ -1.59
HERVK_113P62684 HSPE1P3-201ENST00000559254 309 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC090312.1-201ENST00000580637 348 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AL359999.1-201ENST00000604513 294 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HERVK_113P62684 MIR6891-201ENST00000618788 93 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC140113.4-201ENST00000622087 222 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 PISRT1-201ENST00000626175 531 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HERVK_113P62684 AC083843.3-201ENST00000623679 2186 ntBASIC5.14□□□□□ -1.59
HERVK_113P62684 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HERVK_113P62684 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 AL158163.1-201ENST00000603915 1649 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC117529.2-201ENST00000512159 2068 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 SPRR2C-201ENST00000290702 219 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HERVK_113P62684 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 MIR649-201ENST00000384843 97 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 RNU6-876P-201ENST00000391295 104 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 SNORA11F-201ENST00000408237 128 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 RPL6P29-201ENST00000414863 865 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 RPL36AP36-201ENST00000418616 301 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.13□□□□□ -1.59
HERVK_113P62684 AC099336.2-201ENST00000422457 254 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 Z74021.1-201ENST00000423610 407 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC009965.2-201ENST00000425328 970 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 MTND4P28-201ENST00000426217 387 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 RPL23AP52-201ENST00000439311 478 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 DPPA3P1-201ENST00000448050 469 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC099560.2-201ENST00000457554 255 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 RN7SL817P-201ENST00000480777 288 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 HMGB1P36-201ENST00000487709 576 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC006390.1-201ENST00000508068 283 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC117522.1-201ENST00000509821 380 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC105914.1-201ENST00000511798 226 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.13□□□□□ -1.59
HERVK_113P62684 RNU2-46P-201ENST00000517038 113 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.13□□□□□ -1.59
HERVK_113P62684 AP001646.1-201ENST00000527936 915 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 CYCSP28-201ENST00000534284 321 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.13□□□□□ -1.59
HERVK_113P62684 LSM6P2-201ENST00000552208 177 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.13□□□□□ -1.59
HERVK_113P62684 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.13□□□□□ -1.59
HERVK_113P62684 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 AC005730.3-201ENST00000583067 366 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 HMGN1P30-201ENST00000589286 268 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 Y_RNA.804-201ENST00000615262 101 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC002553.4-201ENST00000616896 331 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC140479.6-201ENST00000633535 357 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERVK_113P62684 AL122126.1-201ENST00000546905 1318 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.13□□□□□ -1.59
HERVK_113P62684 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 LARP1BP1-201ENST00000506036 1359 ntBASIC5.13□□□□□ -1.59
HERVK_113P62684 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms