Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PEX3P56589 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PEX3P56589 AP000568.1-201ENST00000282964 442 ntBASIC3.6□□□□□ -1.83
PEX3P56589 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
PEX3P56589 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PEX3P56589 TAF9BP1-201ENST00000396646 746 ntBASIC3.6□□□□□ -1.83
PEX3P56589 GSTA8P-201ENST00000404253 637 ntBASIC3.6□□□□□ -1.83
PEX3P56589 MTCO3P31-201ENST00000405526 789 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 RPS3AP37-201ENST00000419176 745 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AL049610.1-201ENST00000423374 372 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC092648.1-201ENST00000425870 423 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 MTND2P5-201ENST00000432656 1006 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC091862.1-201ENST00000438016 1100 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 TXNP1-201ENST00000441872 371 ntBASIC3.6□□□□□ -1.83
PEX3P56589 HMGB3P6-201ENST00000444896 598 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC104978.1-201ENST00000449387 391 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC079776.3-201ENST00000450665 370 ntBASIC3.6□□□□□ -1.83
PEX3P56589 RPL23AP14-201ENST00000468281 468 ntBASIC3.6□□□□□ -1.83
PEX3P56589 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PEX3P56589 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.6□□□□□ -1.83
PEX3P56589 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC011352.3-201ENST00000505162 593 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.6□□□□□ -1.83
PEX3P56589 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PEX3P56589 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 RNU6-488P-201ENST00000515918 99 ntBASIC3.6□□□□□ -1.83
PEX3P56589 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AP000790.1-201ENST00000528891 737 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC074029.1-201ENST00000552531 1044 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.6□□□□□ -1.83
PEX3P56589 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.6□□□□□ -1.83
PEX3P56589 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.6□□□□□ -1.83
PEX3P56589 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.6□□□□□ -1.83
PEX3P56589 MTCO2P2-201ENST00000591258 225 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.6□□□□□ -1.83
PEX3P56589 AL606834.2-201ENST00000602954 668 ntBASIC3.6□□□□□ -1.83
PEX3P56589 AC096577.2-201ENST00000611455 153 ntBASIC3.6□□□□□ -1.83
PEX3P56589 MIR7112-201ENST00000616126 65 ntBASIC3.6□□□□□ -1.83
PEX3P56589 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
PEX3P56589 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.6□□□□□ -1.83
PEX3P56589 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PEX3P56589 LINC02211-204ENST00000642024 1070 ntBASIC3.6□□□□□ -1.83
PEX3P56589 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.6□□□□□ -1.83
PEX3P56589 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PEX3P56589 AP005901.5-201ENST00000545779 1796 ntBASIC3.6□□□□□ -1.83
PEX3P56589 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PEX3P56589 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PEX3P56589 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PEX3P56589 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PEX3P56589 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.83
PEX3P56589 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PEX3P56589 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PEX3P56589 RNU6-582P-201ENST00000362989 107 ntBASIC3.59□□□□□ -1.83
PEX3P56589 RNA5SP387-201ENST00000364226 106 ntBASIC3.59□□□□□ -1.83
PEX3P56589 snoZ40.1-201ENST00000364540 72 ntBASIC3.59□□□□□ -1.83
PEX3P56589 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PEX3P56589 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PEX3P56589 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.59□□□□□ -1.83
PEX3P56589 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PEX3P56589 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 RN7SKP285-201ENST00000410137 318 ntBASIC3.59□□□□□ -1.83
PEX3P56589 RNA5SP229-201ENST00000410809 99 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AL356320.2-201ENST00000417263 507 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AC233981.1-201ENST00000423224 461 ntBASIC3.59□□□□□ -1.83
PEX3P56589 RPL7P44-201ENST00000424827 742 ntBASIC3.59□□□□□ -1.83
PEX3P56589 RPP40P1-201ENST00000426762 456 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 USP9YP31-201ENST00000431405 881 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.59□□□□□ -1.83
PEX3P56589 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 CST9LP2-201ENST00000437612 320 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.59□□□□□ -1.83
PEX3P56589 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.59□□□□□ -1.83
PEX3P56589 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 AL589880.1-201ENST00000448271 287 ntBASIC3.59□□□□□ -1.83
PEX3P56589 Z99714.1-201ENST00000450463 807 ntBASIC3.59□□□□□ -1.83
PEX3P56589 ZNF886P-201ENST00000450781 723 ntBASIC3.59□□□□□ -1.83
PEX3P56589 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 snoU13.7-201ENST00000459220 104 ntBASIC3.59□□□□□ -1.83
PEX3P56589 snoU13.22-201ENST00000459428 104 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.59□□□□□ -1.83
PEX3P56589 RPL23AP44-201ENST00000482216 473 ntBASIC3.59□□□□□ -1.83
PEX3P56589 AC110794.1-201ENST00000505816 425 ntBASIC3.59□□□□□ -1.83
PEX3P56589 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.59□□□□□ -1.83
PEX3P56589 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.59□□□□□ -1.83
PEX3P56589 AC109471.1-201ENST00000511631 612 ntBASIC3.59□□□□□ -1.83
PEX3P56589 RNU6-885P-201ENST00000516607 104 ntBASIC3.59□□□□□ -1.83
PEX3P56589 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.59□□□□□ -1.83
PEX3P56589 MTND2P26-201ENST00000528255 1029 ntBASIC3.59□□□□□ -1.83
PEX3P56589 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms