Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDH13P55290 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH13P55290 ZNF542P-204ENST00000482727 1305 ntBASIC3.72□□□□□ -1.81
CDH13P55290 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH13P55290 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH13P55290 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDH13P55290 RNA5SP189-201ENST00000364920 115 ntBASIC3.72□□□□□ -1.81
CDH13P55290 MIR141-201ENST00000384975 95 ntBASIC3.72□□□□□ -1.81
CDH13P55290 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
CDH13P55290 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 RPL21P109-201ENST00000422213 475 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC007742.1-201ENST00000425789 329 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL035407.1-201ENST00000429211 571 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC016712.1-201ENST00000431088 378 ntBASIC3.72□□□□□ -1.81
CDH13P55290 BMS1P19-201ENST00000433925 393 ntBASIC3.72□□□□□ -1.81
CDH13P55290 ELOCP26-201ENST00000436067 329 ntBASIC3.72□□□□□ -1.81
CDH13P55290 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH13P55290 SNRPEP7-201ENST00000438350 220 ntBASIC3.72□□□□□ -1.81
CDH13P55290 Z95327.1-201ENST00000446082 482 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH13P55290 NPM1P49-201ENST00000448027 714 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC009220.1-201ENST00000451614 275 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH13P55290 SNRPGP5-201ENST00000456003 220 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH13P55290 AL139824.2-201ENST00000458731 1095 ntBASIC3.72□□□□□ -1.81
CDH13P55290 RPL31P50-201ENST00000471002 296 ntBASIC3.72□□□□□ -1.81
CDH13P55290 NDUFA5P9-201ENST00000472609 340 ntBASIC3.72□□□□□ -1.81
CDH13P55290 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
CDH13P55290 FAM172BP-201ENST00000487497 1089 ntBASIC3.72□□□□□ -1.81
CDH13P55290 CEACAMP10-202ENST00000495431 496 ntBASIC3.72□□□□□ -1.81
CDH13P55290 MTCYBP35-201ENST00000503630 1137 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC006390.1-201ENST00000508068 283 ntBASIC3.72□□□□□ -1.81
CDH13P55290 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH13P55290 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.72□□□□□ -1.81
CDH13P55290 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH13P55290 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 AC239860.2-201ENST00000525886 270 ntBASIC3.72□□□□□ -1.81
CDH13P55290 MTCYBP41-201ENST00000528913 1123 ntBASIC3.72□□□□□ -1.81
CDH13P55290 HIGD1AP5-201ENST00000529959 259 ntBASIC3.72□□□□□ -1.81
CDH13P55290 OR4P1P-201ENST00000530808 1136 ntBASIC3.72□□□□□ -1.81
CDH13P55290 UBE2NP1-201ENST00000545592 458 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH13P55290 DUXAP6-201ENST00000553858 601 ntBASIC3.72□□□□□ -1.81
CDH13P55290 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CDH13P55290 AC009101.1-201ENST00000568135 242 ntBASIC3.72□□□□□ -1.81
CDH13P55290 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH13P55290 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH13P55290 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH13P55290 AL137849.1-201ENST00000604767 169 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
CDH13P55290 Z99289.3-201ENST00000605586 594 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL596245.1-201ENST00000618994 362 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AL445264.1-201ENST00000621719 171 ntBASIC3.72□□□□□ -1.81
CDH13P55290 AC112484.5-201ENST00000624189 228 ntBASIC3.72□□□□□ -1.81
CDH13P55290 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH13P55290 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH13P55290 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CDH13P55290 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.71□□□□□ -1.81
CDH13P55290 AC116096.1-201ENST00000566804 2314 ntBASIC3.71□□□□□ -1.82
CDH13P55290 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CDH13P55290 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CDH13P55290 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH13P55290 RNU5A-2P-201ENST00000384337 116 ntBASIC3.71□□□□□ -1.82
CDH13P55290 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDH13P55290 AL022722.2-201ENST00000402519 180 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AL138880.1-201ENST00000405824 642 ntBASIC3.71□□□□□ -1.82
CDH13P55290 PIGPP2-201ENST00000411569 458 ntBASIC3.71□□□□□ -1.82
CDH13P55290 RPS7P15-201ENST00000415804 584 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AC099677.1-201ENST00000420575 175 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AC005005.2-201ENST00000420779 380 ntBASIC3.71□□□□□ -1.82
CDH13P55290 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH13P55290 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH13P55290 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
CDH13P55290 RPL21P112-201ENST00000434403 463 ntBASIC3.71□□□□□ -1.82
CDH13P55290 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH13P55290 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH13P55290 AC104978.1-201ENST00000449387 391 ntBASIC3.71□□□□□ -1.82
CDH13P55290 RPL5P32-201ENST00000454085 879 ntBASIC3.71□□□□□ -1.82
CDH13P55290 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH13P55290 RPL7P19-201ENST00000469948 618 ntBASIC3.71□□□□□ -1.82
CDH13P55290 COX7A2P2-201ENST00000505291 250 ntBASIC3.71□□□□□ -1.82
CDH13P55290 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH13P55290 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH13P55290 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH13P55290 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH13P55290 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH13P55290 UBTFL10-201ENST00000528532 562 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AP004242.1-201ENST00000533701 349 ntBASIC3.71□□□□□ -1.82
CDH13P55290 SETP7-201ENST00000552169 453 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AL121603.1-201ENST00000553815 142 ntBASIC3.71□□□□□ -1.82
CDH13P55290 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH13P55290 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH13P55290 AC020914.6-201ENST00000594327 272 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms