Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH4P55283 AL672296.1-201ENST00000427780 2158 ntBASIC3.31□□□□□ -1.88
CDH4P55283 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 ZNF849P-201ENST00000594711 1566 ntBASIC3.3□□□□□ -1.88
CDH4P55283 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH4P55283 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH4P55283 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 AL353746.1-201ENST00000566293 6881 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
CDH4P55283 DEFB109C-201ENST00000382575 264 ntBASIC3.3□□□□□ -1.88
CDH4P55283 DEFB109B-201ENST00000382656 264 ntBASIC3.3□□□□□ -1.88
CDH4P55283 MIR16-1-201ENST00000385271 89 ntBASIC3.3□□□□□ -1.88
CDH4P55283 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
CDH4P55283 PTGES3P2-201ENST00000407942 482 ntBASIC3.3□□□□□ -1.88
CDH4P55283 RAD23BP2-201ENST00000416003 1207 ntBASIC3.3□□□□□ -1.88
CDH4P55283 BX664727.1-201ENST00000416024 466 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AL353678.1-201ENST00000422735 741 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH4P55283 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH4P55283 CDC42P1-201ENST00000456658 548 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC078857.1-201ENST00000469870 667 ntBASIC3.3□□□□□ -1.88
CDH4P55283 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
CDH4P55283 AC004062.1-201ENST00000509926 645 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC109471.1-201ENST00000511631 612 ntBASIC3.3□□□□□ -1.88
CDH4P55283 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH4P55283 NDUFB9P3-201ENST00000521269 501 ntBASIC3.3□□□□□ -1.88
CDH4P55283 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH4P55283 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH4P55283 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH4P55283 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH4P55283 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH4P55283 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH4P55283 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 AC133794.1-201ENST00000602731 914 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AL355812.1-201ENST00000603215 216 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AL365503.1-201ENST00000605247 905 ntBASIC3.3□□□□□ -1.88
CDH4P55283 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 AC138932.5-201ENST00000617759 563 ntBASIC3.3□□□□□ -1.88
CDH4P55283 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
CDH4P55283 MIR3651-201ENST00000630427 90 ntBASIC3.3□□□□□ -1.88
CDH4P55283 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
CDH4P55283 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH4P55283 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
CDH4P55283 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH4P55283 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH4P55283 MTND4P34-201ENST00000572715 1371 ntBASIC3.29□□□□□ -1.88
CDH4P55283 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH4P55283 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
CDH4P55283 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH4P55283 GSTA8P-201ENST00000404253 637 ntBASIC3.29□□□□□ -1.88
CDH4P55283 MTCO3P12-201ENST00000416718 547 ntBASIC3.29□□□□□ -1.88
CDH4P55283 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
CDH4P55283 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH4P55283 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
CDH4P55283 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH4P55283 AC234064.1-201ENST00000436312 247 ntBASIC3.29□□□□□ -1.88
CDH4P55283 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH4P55283 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
CDH4P55283 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH4P55283 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
CDH4P55283 AC121161.1-201ENST00000510606 652 ntBASIC3.29□□□□□ -1.88
CDH4P55283 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH4P55283 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH4P55283 MTCO1P40-201ENST00000574371 625 ntBASIC3.29□□□□□ -1.88
CDH4P55283 MIR4789-201ENST00000577469 82 ntBASIC3.29□□□□□ -1.88
CDH4P55283 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH4P55283 XIAPP1-201ENST00000603162 600 ntBASIC3.29□□□□□ -1.88
CDH4P55283 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH4P55283 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH4P55283 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDH4P55283 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH4P55283 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
CDH4P55283 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH4P55283 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH4P55283 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH4P55283 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH4P55283 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
CDH4P55283 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CDH4P55283 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH4P55283 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
CDH4P55283 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CDH4P55283 RNU6-1249P-201ENST00000363237 111 ntBASIC3.28□□□□□ -1.88
CDH4P55283 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.28□□□□□ -1.88
CDH4P55283 RNA5SP31-201ENST00000411144 127 ntBASIC3.28□□□□□ -1.88
CDH4P55283 LIPT1P1-201ENST00000415870 1186 ntBASIC3.28□□□□□ -1.88
CDH4P55283 FNDC3CP-201ENST00000420795 1155 ntBASIC3.28□□□□□ -1.88
CDH4P55283 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
CDH4P55283 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH4P55283 DEFB130D-201ENST00000426866 237 ntBASIC3.28□□□□□ -1.88
CDH4P55283 BX890604.2-201ENST00000427883 474 ntBASIC3.28□□□□□ -1.88
CDH4P55283 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH4P55283 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH4P55283 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms