Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PMS1P54277 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PMS1P54277 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PMS1P54277 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.33□□□□□ -1.56
PMS1P54277 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 AL157700.1-201ENST00000561973 1432 ntBASIC5.32□□□□□ -1.56
PMS1P54277 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 BTBD10P1-201ENST00000549824 1352 ntBASIC5.32□□□□□ -1.56
PMS1P54277 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PMS1P54277 NACAP2-201ENST00000318548 624 ntBASIC5.32□□□□□ -1.56
PMS1P54277 RN7SKP224-201ENST00000364140 325 ntBASIC5.32□□□□□ -1.56
PMS1P54277 MIR1-2-201ENST00000384961 85 ntBASIC5.32□□□□□ -1.56
PMS1P54277 MIR765-201ENST00000390226 114 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AL354719.1-201ENST00000406535 843 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.32□□□□□ -1.56
PMS1P54277 AL358176.3-201ENST00000420757 454 ntBASIC5.32□□□□□ -1.56
PMS1P54277 BX510359.3-201ENST00000422168 306 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AC092832.1-201ENST00000422934 400 ntBASIC5.32□□□□□ -1.56
PMS1P54277 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AL356276.2-201ENST00000435919 558 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AC140076.1-201ENST00000449897 361 ntBASIC5.32□□□□□ -1.56
PMS1P54277 RPS3AP50-201ENST00000487064 803 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AK3P4-201ENST00000504283 583 ntBASIC5.32□□□□□ -1.56
PMS1P54277 GAPDHP56-201ENST00000506031 988 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AC006499.3-201ENST00000506077 748 ntBASIC5.32□□□□□ -1.56
PMS1P54277 PCBP2P3-201ENST00000509726 843 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AC110792.2-201ENST00000510278 224 ntBASIC5.32□□□□□ -1.56
PMS1P54277 RNU6-1153P-201ENST00000516760 105 ntBASIC5.32□□□□□ -1.56
PMS1P54277 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.32□□□□□ -1.56
PMS1P54277 Y_RNA.719-201ENST00000517156 106 ntBASIC5.32□□□□□ -1.56
PMS1P54277 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AC022690.1-201ENST00000526681 550 ntBASIC5.32□□□□□ -1.56
PMS1P54277 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.32□□□□□ -1.56
PMS1P54277 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.32□□□□□ -1.56
PMS1P54277 AL354950.2-201ENST00000617939 290 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.32□□□□□ -1.56
PMS1P54277 AL159972.1-201ENST00000625150 448 ntBASIC5.32□□□□□ -1.56
PMS1P54277 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.32□□□□□ -1.56
PMS1P54277 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PMS1P54277 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 PCAT14-202ENST00000627127 3935 ntBASIC5.32□□□□□ -1.56
PMS1P54277 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PMS1P54277 SCARNA15-201ENST00000607520 4325 ntBASIC5.32□□□□□ -1.56
PMS1P54277 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.31□□□□□ -1.56
PMS1P54277 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PMS1P54277 NEAT1-202ENST00000501122 22743 ntBASIC5.31□□□□□ -1.56
PMS1P54277 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PMS1P54277 DHX9P1-201ENST00000436565 3076 ntBASIC5.31□□□□□ -1.56
PMS1P54277 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PMS1P54277 RNU1-83P-201ENST00000363426 164 ntBASIC5.31□□□□□ -1.56
PMS1P54277 SNORD81.2-201ENST00000365153 76 ntBASIC5.31□□□□□ -1.56
PMS1P54277 Z97832.1-201ENST00000402490 328 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AL591416.1-201ENST00000404015 867 ntBASIC5.31□□□□□ -1.56
PMS1P54277 FAT1P1-201ENST00000406588 507 ntBASIC5.31□□□□□ -1.56
PMS1P54277 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.31□□□□□ -1.56
PMS1P54277 MIR1271-201ENST00000408537 86 ntBASIC5.31□□□□□ -1.56
PMS1P54277 RNU2-21P-201ENST00000410368 188 ntBASIC5.31□□□□□ -1.56
PMS1P54277 EEF1A1P40-201ENST00000412883 573 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AC004938.1-201ENST00000438468 308 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.31□□□□□ -1.56
PMS1P54277 EIF4A1P11-201ENST00000451239 222 ntBASIC5.31□□□□□ -1.56
PMS1P54277 RPS27AP17-201ENST00000463344 455 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AC093278.1-201ENST00000494700 600 ntBASIC5.31□□□□□ -1.56
PMS1P54277 FGF7P4-201ENST00000509595 295 ntBASIC5.31□□□□□ -1.56
PMS1P54277 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.31□□□□□ -1.56
PMS1P54277 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 SCARNA24.1-201ENST00000516465 137 ntBASIC5.31□□□□□ -1.56
PMS1P54277 RN7SKP66-201ENST00000516681 231 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 AC079075.1-201ENST00000559543 878 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC037471.2-201ENST00000564941 598 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.31□□□□□ -1.56
PMS1P54277 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.31□□□□□ -1.56
PMS1P54277 SNORA74C-1-201ENST00000580726 201 ntBASIC5.31□□□□□ -1.56
PMS1P54277 VN1R80P-201ENST00000597126 338 ntBASIC5.31□□□□□ -1.56
PMS1P54277 KC877982.1-201ENST00000602313 470 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC020910.3-201ENST00000603701 874 ntBASIC5.31□□□□□ -1.56
PMS1P54277 AC025588.3-201ENST00000604182 274 ntBASIC5.31□□□□□ -1.56
PMS1P54277 OR6R2P-201ENST00000609216 300 ntBASIC5.31□□□□□ -1.56
PMS1P54277 MIR6826-201ENST00000617808 98 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms