Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 RNU5F-6P-201ENST00000362979 116 ntBASIC4.43□□□□□ -1.7
COPB1P53618 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 U3.22-201ENST00000391120 215 ntBASIC4.43□□□□□ -1.7
COPB1P53618 MTCYBP36-201ENST00000404146 440 ntBASIC4.43□□□□□ -1.7
COPB1P53618 ZNF603P-201ENST00000405613 487 ntBASIC4.43□□□□□ -1.7
COPB1P53618 MIR1193-201ENST00000408109 78 ntBASIC4.43□□□□□ -1.7
COPB1P53618 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPB1P53618 RNU4-25P-201ENST00000410569 230 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AL389915.1-201ENST00000422463 466 ntBASIC4.43□□□□□ -1.7
COPB1P53618 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 CBX1P1-201ENST00000440184 427 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC091564.1-201ENST00000464563 479 ntBASIC4.43□□□□□ -1.7
COPB1P53618 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.43□□□□□ -1.7
COPB1P53618 AC006511.1-201ENST00000470614 315 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AP000797.1-201ENST00000478870 387 ntBASIC4.43□□□□□ -1.7
COPB1P53618 RPL9P33-201ENST00000484311 566 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC109927.2-201ENST00000506416 303 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.43□□□□□ -1.7
COPB1P53618 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 OR4A45P-201ENST00000529954 901 ntBASIC4.43□□□□□ -1.7
COPB1P53618 OR4A12P-201ENST00000530847 918 ntBASIC4.43□□□□□ -1.7
COPB1P53618 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPB1P53618 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.43□□□□□ -1.7
COPB1P53618 AC074029.1-201ENST00000552531 1044 ntBASIC4.43□□□□□ -1.7
COPB1P53618 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.43□□□□□ -1.7
COPB1P53618 AC245505.1-201ENST00000556398 224 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.43□□□□□ -1.7
COPB1P53618 AC008498.1-201ENST00000613012 531 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.43□□□□□ -1.7
COPB1P53618 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 AC068137.3-201ENST00000639191 341 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC073869.6-201ENST00000640656 341 ntBASIC4.43□□□□□ -1.7
COPB1P53618 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPB1P53618 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.43□□□□□ -1.7
COPB1P53618 AC092447.7-201ENST00000422212 1621 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC117529.2-201ENST00000512159 2068 ntBASIC4.42□□□□□ -1.7
COPB1P53618 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.42□□□□□ -1.7
COPB1P53618 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 Y_RNA.97-201ENST00000363094 102 ntBASIC4.42□□□□□ -1.7
COPB1P53618 RNU6-921P-201ENST00000384361 107 ntBASIC4.42□□□□□ -1.7
COPB1P53618 SNRPEP2-201ENST00000397592 279 ntBASIC4.42□□□□□ -1.7
COPB1P53618 FCF1P9-201ENST00000412546 282 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC011933.1-201ENST00000413334 321 ntBASIC4.42□□□□□ -1.7
COPB1P53618 RPL17P12-201ENST00000413391 526 ntBASIC4.42□□□□□ -1.7
COPB1P53618 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 RPL21P32-201ENST00000419877 477 ntBASIC4.42□□□□□ -1.7
COPB1P53618 FNDC3CP-201ENST00000420795 1155 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC099336.2-201ENST00000422457 254 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC009965.2-201ENST00000425328 970 ntBASIC4.42□□□□□ -1.7
COPB1P53618 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 BTF3P10-201ENST00000433415 495 ntBASIC4.42□□□□□ -1.7
COPB1P53618 ATP5HP2-201ENST00000433885 485 ntBASIC4.42□□□□□ -1.7
COPB1P53618 KCTD9P3-201ENST00000434597 1169 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.42□□□□□ -1.7
COPB1P53618 AF228730.2-201ENST00000438784 848 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 RPL39P6-201ENST00000448289 150 ntBASIC4.42□□□□□ -1.7
COPB1P53618 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 AC099560.2-201ENST00000457554 255 ntBASIC4.42□□□□□ -1.7
COPB1P53618 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.42□□□□□ -1.7
COPB1P53618 AC116533.1-201ENST00000459748 321 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AP000893.1-201ENST00000474462 794 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.42□□□□□ -1.7
COPB1P53618 RN7SL271P-201ENST00000487601 295 ntBASIC4.42□□□□□ -1.7
COPB1P53618 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 AC116347.2-201ENST00000514912 523 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COPB1P53618 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
COPB1P53618 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 AC025627.2-201ENST00000576220 160 ntBASIC4.42□□□□□ -1.7
COPB1P53618 MIR4528-201ENST00000577763 90 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.42□□□□□ -1.7
COPB1P53618 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 AC005771.1-201ENST00000585581 349 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.42□□□□□ -1.7
COPB1P53618 HMGB1P50-201ENST00000605814 607 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC108747.1-201ENST00000609508 535 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC068944.2-201ENST00000610373 403 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AL589743.7-201ENST00000612637 233 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.42□□□□□ -1.7
COPB1P53618 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.42□□□□□ -1.7
COPB1P53618 AC012020.1-201ENST00000624541 1728 ntBASIC4.42□□□□□ -1.7
COPB1P53618 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COPB1P53618 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.42□□□□□ -1.7
COPB1P53618 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.42□□□□□ -1.7
COPB1P53618 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.42□□□□□ -1.7
COPB1P53618 IPO8P1-201ENST00000455509 3109 ntBASIC4.42□□□□□ -1.7
COPB1P53618 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms