Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.92□□□□□ -1.94
NUP98P52948 MIR4716-201ENST00000579628 84 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 AC034236.3-201ENST00000605999 461 ntBASIC2.92□□□□□ -1.94
NUP98P52948 MIR1291-201ENST00000627649 87 ntBASIC2.92□□□□□ -1.94
NUP98P52948 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
NUP98P52948 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
NUP98P52948 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
NUP98P52948 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NUP98P52948 AC110792.3-201ENST00000595906 1614 ntBASIC2.92□□□□□ -1.94
NUP98P52948 AC009501.3-201ENST00000605001 1352 ntBASIC2.92□□□□□ -1.94
NUP98P52948 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NUP98P52948 PNPT1P2-201ENST00000456768 2050 ntBASIC2.91□□□□□ -1.94
NUP98P52948 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NUP98P52948 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NUP98P52948 SNORA62.2-201ENST00000364672 152 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AL079342.1-201ENST00000401460 267 ntBASIC2.91□□□□□ -1.94
NUP98P52948 MIR1289-2-201ENST00000408360 111 ntBASIC2.91□□□□□ -1.94
NUP98P52948 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AC073464.3-201ENST00000422564 712 ntBASIC2.91□□□□□ -1.94
NUP98P52948 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 RPL23AP49-201ENST00000492925 468 ntBASIC2.91□□□□□ -1.94
NUP98P52948 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 AL133370.2-201ENST00000619934 439 ntBASIC2.91□□□□□ -1.94
NUP98P52948 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
NUP98P52948 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NUP98P52948 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NUP98P52948 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NUP98P52948 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
NUP98P52948 GSTA12P-201ENST00000402398 508 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AL023284.1-201ENST00000403956 276 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AC104058.1-201ENST00000448028 297 ntBASIC2.91□□□□□ -1.94
NUP98P52948 RPL36AP33-201ENST00000450395 310 ntBASIC2.91□□□□□ -1.94
NUP98P52948 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 Y_RNA.638-201ENST00000459374 113 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.91□□□□□ -1.94
NUP98P52948 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.91□□□□□ -1.94
NUP98P52948 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NUP98P52948 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 AGGF1P8-201ENST00000562979 1000 ntBASIC2.91□□□□□ -1.94
NUP98P52948 MIR3186-201ENST00000577404 85 ntBASIC2.91□□□□□ -1.94
NUP98P52948 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP98P52948 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.91□□□□□ -1.94
NUP98P52948 AC145207.9-201ENST00000623802 325 ntBASIC2.91□□□□□ -1.94
NUP98P52948 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NUP98P52948 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NUP98P52948 SNORA25.6-201ENST00000364121 118 ntBASIC2.9□□□□□ -1.95
NUP98P52948 RN7SKP32-201ENST00000410167 303 ntBASIC2.9□□□□□ -1.95
NUP98P52948 RNU6-233P-201ENST00000410845 141 ntBASIC2.9□□□□□ -1.95
NUP98P52948 TRGV6-201ENST00000417928 299 ntBASIC2.9□□□□□ -1.95
NUP98P52948 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP98P52948 NPM1P52-201ENST00000518264 846 ntBASIC2.9□□□□□ -1.95
NUP98P52948 SMARCE1P4-201ENST00000523647 241 ntBASIC2.9□□□□□ -1.95
NUP98P52948 AC084757.1-201ENST00000559987 490 ntBASIC2.9□□□□□ -1.95
NUP98P52948 AC234775.3-201ENST00000564612 656 ntBASIC2.9□□□□□ -1.95
NUP98P52948 AL161912.3-201ENST00000605404 628 ntBASIC2.9□□□□□ -1.95
NUP98P52948 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 RPL21P132-201ENST00000331267 462 ntBASIC2.89□□□□□ -1.95
NUP98P52948 RNU6-253P-201ENST00000384730 105 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AL591416.1-201ENST00000404015 867 ntBASIC2.89□□□□□ -1.95
NUP98P52948 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 AL159169.1-201ENST00000421119 127 ntBASIC2.89□□□□□ -1.95
NUP98P52948 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 UBE2V2P4-201ENST00000447495 259 ntBASIC2.89□□□□□ -1.95
NUP98P52948 RPL30P9-201ENST00000465586 330 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC068587.2-201ENST00000478386 781 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC108860.1-201ENST00000484521 383 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AL024509.2-201ENST00000493462 493 ntBASIC2.89□□□□□ -1.95
NUP98P52948 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 AC022790.1-201ENST00000522872 204 ntBASIC2.89□□□□□ -1.95
NUP98P52948 MTCYBP20-201ENST00000524239 1129 ntBASIC2.89□□□□□ -1.95
NUP98P52948 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.89□□□□□ -1.95
NUP98P52948 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 AL845331.3-202ENST00000562856 261 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC098826.3-201ENST00000603823 466 ntBASIC2.89□□□□□ -1.95
NUP98P52948 BX664608.1-201ENST00000610519 487 ntBASIC2.89□□□□□ -1.95
NUP98P52948 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 SNORD114-1-201ENST00000362705 72 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP98P52948 AC106872.3-201ENST00000495104 446 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC012170.1-201ENST00000495139 359 ntBASIC2.89□□□□□ -1.95
NUP98P52948 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 AC104090.1-201ENST00000506341 1171 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC111000.5-201ENST00000506559 1178 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP98P52948 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.89□□□□□ -1.95
NUP98P52948 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP98P52948 AC025811.1-201ENST00000604312 472 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC010680.4-201ENST00000605334 543 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AC103710.3-201ENST00000608157 948 ntBASIC2.89□□□□□ -1.95
NUP98P52948 AL450489.1-201ENST00000612071 468 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms