Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC073114.1-201ENST00000612027 490 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 AC243773.3-201ENST00000613270 256 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 MIR6875-201ENST00000617506 72 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 Z69908.1-201ENST00000622603 247 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 MIR6500-201ENST00000622700 86 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 AC079228.1-201ENST00000624774 1049 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCNKAP51800 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLCNKAP51800 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CLCNKAP51800 AC021755.1-201ENST00000559747 1447 ntBASIC3.93□□□□□ -1.78
CLCNKAP51800 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLCNKAP51800 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLCNKAP51800 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.93□□□□□ -1.78
CLCNKAP51800 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLCNKAP51800 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.93□□□□□ -1.78
CLCNKAP51800 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCNKAP51800 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 MAPK10-372ENST00000641954 3413 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
CLCNKAP51800 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.92□□□□□ -1.78
CLCNKAP51800 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 RPL21P132-201ENST00000331267 462 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 RNU6-1243P-201ENST00000364028 107 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 Y_RNA.302-201ENST00000364997 102 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 RNU1-64P-201ENST00000365443 163 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 RNU6-213P-201ENST00000384051 104 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 RNU6-1226P-201ENST00000384317 107 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 SNORA3C-201ENST00000408792 125 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC069218.2-201ENST00000411665 344 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 AL953862.1-201ENST00000423016 168 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC093698.1-201ENST00000423843 571 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 MTCYBP39-201ENST00000437562 491 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 HMGB3P22-202ENST00000451823 572 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 RN7SL132P-201ENST00000478131 296 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 VN1R105P-201ENST00000486595 910 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 AC026402.1-201ENST00000513642 170 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 OR4A12P-201ENST00000530847 918 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 YPEL5P3-201ENST00000547227 352 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC008127.2-201ENST00000549925 1075 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.92□□□□□ -1.78
CLCNKAP51800 MTCYBP33-201ENST00000575007 1130 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 VN1R92P-201ENST00000598511 928 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 AL606490.9-201ENST00000603331 271 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 HMGB1P50-201ENST00000605814 607 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC233309.1-201ENST00000619522 751 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC008443.7-201ENST00000622195 246 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLCNKAP51800 AC231657.1-201ENST00000624313 397 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 AC099063.3-201ENST00000642066 185 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 MTND5P28-201ENST00000438005 1594 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 MTCO1P24-201ENST00000515438 1558 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.92□□□□□ -1.78
CLCNKAP51800 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLCNKAP51800 FAM35DP-201ENST00000323387 2712 ntBASIC3.92□□□□□ -1.78
CLCNKAP51800 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CLCNKAP51800 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLCNKAP51800 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 MT-TH-201ENST00000387441 69 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 AL023807.1-201ENST00000407932 359 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 MIR1251-201ENST00000408552 70 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 AC073264.1-201ENST00000411508 416 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCNKAP51800 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCNKAP51800 OR4F13P-201ENST00000428478 931 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCNKAP51800 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCNKAP51800 AC129850.1-201ENST00000436203 508 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 MTCO2P16-201ENST00000436962 677 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCNKAP51800 AL117351.1-201ENST00000438864 766 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 RPL23AP16-201ENST00000441715 421 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 RPL23AP33-201ENST00000442301 452 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 EEF1E1P1-201ENST00000446998 430 ntBASIC3.91□□□□□ -1.78
CLCNKAP51800 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCNKAP51800 ZNF114P1-201ENST00000453500 292 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms