Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 RNA5SP50-201ENST00000363731 107 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 AL122016.1-201ENST00000403365 367 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 PRELID3BP11-201ENST00000414230 479 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.9
HCFC1P51610 HSPA8P17-201ENST00000427029 1382 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 ATP5JP1-201ENST00000431631 322 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.21□□□□□ -1.9
HCFC1P51610 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.21□□□□□ -1.9
HCFC1P51610 COX6CP18-201ENST00000448769 222 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 SLC31A1P1-201ENST00000451221 567 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 MTCO3P11-201ENST00000455103 774 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 RN7SL601P-201ENST00000471221 293 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC084198.1-201ENST00000477747 402 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.21□□□□□ -1.9
HCFC1P51610 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.21□□□□□ -1.9
HCFC1P51610 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.21□□□□□ -1.9
HCFC1P51610 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.21□□□□□ -1.9
HCFC1P51610 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 AC092747.2-201ENST00000545069 983 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC002400.1-201ENST00000569310 726 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC115085.1-201ENST00000588924 229 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.21□□□□□ -1.9
HCFC1P51610 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 AC006504.1-201ENST00000562493 3666 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
HCFC1P51610 AC009229.4-201ENST00000623854 1947 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HCFC1P51610 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HCFC1P51610 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HCFC1P51610 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 AC107982.1-201ENST00000507171 1300 ntBASIC3.21□□□□□ -1.9
HCFC1P51610 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HCFC1P51610 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC1P51610 LAP3P1-201ENST00000403648 294 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 RPL7P8-201ENST00000411964 730 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 JKAMPP1-201ENST00000413804 919 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.2□□□□□ -1.9
HCFC1P51610 RPL23AP39-201ENST00000415533 405 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 HSFY4P-201ENST00000415994 1181 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 DBIP2-201ENST00000419076 262 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 TIMM9P2-201ENST00000419324 266 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 FTH1P6-201ENST00000430768 320 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.2□□□□□ -1.9
HCFC1P51610 KCTD9P3-201ENST00000434597 1169 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 MTND2P4-201ENST00000445034 1004 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 RPL5P24-201ENST00000463742 885 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.2□□□□□ -1.9
HCFC1P51610 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC078899.5-201ENST00000612475 178 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.2□□□□□ -1.9
HCFC1P51610 AL136981.2-201ENST00000617319 734 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC069209.1-201ENST00000619282 651 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL603755.1-201ENST00000619504 163 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
HCFC1P51610 CR392039.4-201ENST00000624968 501 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL773545.4-201ENST00000637262 310 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.2□□□□□ -1.9
HCFC1P51610 AL513478.4-201ENST00000641636 310 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC1P51610 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HCFC1P51610 UBE3AP2-201ENST00000429033 2259 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
HCFC1P51610 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HCFC1P51610 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC1P51610 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCFC1P51610 SNORA48.2-201ENST00000390926 124 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.2□□□□□ -1.9
HCFC1P51610 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC098824.1-201ENST00000453565 980 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC104689.1-201ENST00000473356 768 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC013828.1-201ENST00000481845 158 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.2□□□□□ -1.9
HCFC1P51610 AC082651.2-201ENST00000496833 166 ntBASIC3.2□□□□□ -1.9
HCFC1P51610 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms