Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL359265.2-201ENST00000434367 631 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 MTND4LP10-201ENST00000435146 291 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC006466.1-201ENST00000438721 289 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 MTND1P30-201ENST00000441241 901 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 TRIM60P18-201ENST00000441518 828 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 COX6CP2-201ENST00000444980 225 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 TAF9P1-201ENST00000445421 515 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 PAXBP1P1-201ENST00000449315 447 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-1P43699 TAF9P2-201ENST00000454958 515 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 RPS20P32-201ENST00000456044 356 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC116337.2-201ENST00000477662 156 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX2-1P43699 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 RPL23AP72-201ENST00000492447 435 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL024509.2-201ENST00000493462 493 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 RPL31P61-201ENST00000496160 376 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 OR2A20P-203ENST00000498397 1268 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 MTCO3P7-201ENST00000510008 774 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 RNA5SP143-201ENST00000516936 115 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 MTCYBP41-201ENST00000528913 1123 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AP001781.1-201ENST00000530977 207 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL121766.1-201ENST00000547436 487 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 OR6C7P-201ENST00000547875 934 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 GNRHR2P1-201ENST00000555315 631 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC051619.2-201ENST00000559063 397 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX2-1P43699 AP000403.1-201ENST00000603349 851 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL451044.1-201ENST00000604867 238 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC012360.2-201ENST00000609349 391 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL158063.1-201ENST00000615349 536 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AC008443.7-201ENST00000622195 246 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL356585.4-201ENST00000623078 1229 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL773545.4-201ENST00000637262 310 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 CRYM-AS1-204ENST00000637983 556 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 AL513478.4-201ENST00000641636 310 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 AC010928.1-201ENST00000592477 1447 ntBASIC3.41□□□□□ -1.86
NKX2-1P43699 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX2-1P43699 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX2-1P43699 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
NKX2-1P43699 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.4□□□□□ -1.86
NKX2-1P43699 AC008725.1-201ENST00000605123 2263 ntBASIC3.4□□□□□ -1.86
NKX2-1P43699 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
NKX2-1P43699 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 RNU6-359P-201ENST00000365466 108 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 RNU6-1181P-201ENST00000384191 106 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AL138880.1-201ENST00000405824 642 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 RNU6-712P-201ENST00000410558 100 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 TPMTP3-201ENST00000411928 735 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 PGBD4P8-201ENST00000412993 562 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RAD23BP2-201ENST00000416003 1207 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 CYP4F29P-201ENST00000420685 446 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AL590762.4-201ENST00000425885 253 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 BRWD1P3-201ENST00000428816 390 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AL772161.1-201ENST00000439130 476 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 EEF1E1P1-201ENST00000446998 430 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AL592447.1-201ENST00000447592 540 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 NPM1P49-201ENST00000448027 714 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AL353691.1-201ENST00000451332 387 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RPS24P6-201ENST00000452670 400 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RPL23AP81-201ENST00000455252 467 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 DHFRP3-201ENST00000455595 559 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RNA5SP269-201ENST00000459032 137 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AC091564.1-201ENST00000464563 479 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RPS4XP10-201ENST00000465034 731 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 RPS29P19-201ENST00000479709 171 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 HMGB1P22-201ENST00000505315 124 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 OR7H2P-201ENST00000513483 306 ntBASIC3.4□□□□□ -1.87
NKX2-1P43699 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX2-1P43699 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.4□□□□□ -1.87
NKX2-1P43699 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.4□□□□□ -1.87
NKX2-1P43699 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX2-1P43699 AC007599.1-201ENST00000568688 1174 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms