Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA13P31271 PABPC1P7-201ENST00000413177 1513 ntBASIC4.1□□□□□ -1.75
HOXA13P31271 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HOXA13P31271 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA13P31271 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA13P31271 SNRPEP3-201ENST00000338402 276 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 SNORD46.1-201ENST00000364139 104 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA13P31271 MIR506-201ENST00000384998 124 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC068533.2-201ENST00000411872 306 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 TIMM9P2-201ENST00000419324 266 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC005517.2-201ENST00000424673 553 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA13P31271 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HOXA13P31271 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.09□□□□□ -1.75
HOXA13P31271 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 PRSS3P4-201ENST00000453323 162 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC025518.1-201ENST00000479856 347 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA13P31271 MTCYBP17-201ENST00000503579 789 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXA13P31271 SNORA3.4-201ENST00000515969 96 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 RNY4P37-201ENST00000516225 96 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC103843.2-201ENST00000530523 682 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC125611.1-201ENST00000549563 229 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 DUXAP6-201ENST00000553858 601 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AL389895.1-201ENST00000554127 252 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC097065.2-201ENST00000608159 533 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AL354976.1-201ENST00000613843 387 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 AC009318.4-201ENST00000620496 486 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.09□□□□□ -1.75
HOXA13P31271 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 OR5BR1P-201ENST00000524992 1330 ntBASIC4.09□□□□□ -1.75
HOXA13P31271 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA13P31271 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HOXA13P31271 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA13P31271 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 RNA5SP387-201ENST00000364226 106 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 Y_RNA.493-201ENST00000384422 102 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA13P31271 AL024474.1-201ENST00000404655 591 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AL450338.1-201ENST00000407987 512 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 RNU6-757P-201ENST00000410334 100 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 ATP5JP1-201ENST00000431631 322 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AL159987.2-201ENST00000432754 307 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 MTCYBP31-201ENST00000438855 1122 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 RPL39P6-201ENST00000448289 150 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 SLC31A1P1-201ENST00000451221 567 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 CYCSP35-201ENST00000451978 304 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 DNAJC19P1-201ENST00000455312 319 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 ANKRD26P4-201ENST00000455755 950 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC146507.1-201ENST00000468335 354 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 NCOR1P1-202ENST00000486162 291 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.08□□□□□ -1.76
HOXA13P31271 AP000776.1-201ENST00000530032 1663 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 AC023050.2-201ENST00000544968 387 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXA13P31271 AC004987.4-201ENST00000603383 338 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC083899.3-201ENST00000603413 594 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 BNIP3P11-201ENST00000603878 563 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC243773.3-201ENST00000613270 256 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC084757.4-201ENST00000616350 526 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC009237.17-201ENST00000618111 748 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC231657.1-201ENST00000624313 397 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXA13P31271 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA13P31271 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA13P31271 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA13P31271 LINC00561-201ENST00000565815 2738 ntBASIC4.08□□□□□ -1.76
HOXA13P31271 MTCO1P14-201ENST00000441695 1559 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA13P31271 DCAF13P1-201ENST00000495256 1330 ntBASIC4.07□□□□□ -1.76
HOXA13P31271 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms