Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 VN1R91P-201ENST00000594377 169 ntBASIC6.14□□□□□ -1.43
VARSP26640 AL158032.1-201ENST00000605401 106 ntBASIC6.14□□□□□ -1.43
VARSP26640 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 AL731566.2-201ENST00000618971 317 ntBASIC6.14□□□□□ -1.43
VARSP26640 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.14□□□□□ -1.43
VARSP26640 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.14□□□□□ -1.43
VARSP26640 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 SHQ1P1-201ENST00000437111 1544 ntBASIC6.14□□□□□ -1.43
VARSP26640 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.14□□□□□ -1.43
VARSP26640 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VARSP26640 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.13□□□□□ -1.43
VARSP26640 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VARSP26640 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 Y_RNA.105-201ENST00000363182 111 ntBASIC6.13□□□□□ -1.43
VARSP26640 RNU6-1078P-201ENST00000364522 103 ntBASIC6.13□□□□□ -1.43
VARSP26640 RNU6-378P-201ENST00000384324 107 ntBASIC6.13□□□□□ -1.43
VARSP26640 RNU2-25P-201ENST00000411041 191 ntBASIC6.13□□□□□ -1.43
VARSP26640 RPL12P16-201ENST00000431098 498 ntBASIC6.13□□□□□ -1.43
VARSP26640 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.13□□□□□ -1.43
VARSP26640 RPS3AP46-201ENST00000448352 682 ntBASIC6.13□□□□□ -1.43
VARSP26640 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.13□□□□□ -1.43
VARSP26640 AC007967.1-201ENST00000455422 1159 ntBASIC6.13□□□□□ -1.43
VARSP26640 AC087385.1-201ENST00000475062 312 ntBASIC6.13□□□□□ -1.43
VARSP26640 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
VARSP26640 HMGN1P16-201ENST00000508308 283 ntBASIC6.13□□□□□ -1.43
VARSP26640 RNU7-4P-201ENST00000516961 62 ntBASIC6.13□□□□□ -1.43
VARSP26640 RNU6-1212P-201ENST00000517023 104 ntBASIC6.13□□□□□ -1.43
VARSP26640 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.13□□□□□ -1.43
VARSP26640 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.13□□□□□ -1.43
VARSP26640 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 MIR4502-201ENST00000580432 81 ntBASIC6.13□□□□□ -1.43
VARSP26640 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.13□□□□□ -1.43
VARSP26640 GLYATL1P2-202ENST00000588046 902 ntBASIC6.13□□□□□ -1.43
VARSP26640 AC012669.1-201ENST00000603209 283 ntBASIC6.13□□□□□ -1.43
VARSP26640 FAM27E4-201ENST00000605259 342 ntBASIC6.13□□□□□ -1.43
VARSP26640 AP001282.2-201ENST00000616149 309 ntBASIC6.13□□□□□ -1.43
VARSP26640 AL589994.2-201ENST00000621124 579 ntBASIC6.13□□□□□ -1.43
VARSP26640 AC125336.1-201ENST00000508893 2827 ntBASIC6.13□□□□□ -1.43
VARSP26640 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.13□□□□□ -1.43
VARSP26640 AC097063.1-201ENST00000426714 1797 ntBASIC6.13□□□□□ -1.43
VARSP26640 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 GUCY1B2-204ENST00000531898 1979 ntBASIC6.13□□□□□ -1.43
VARSP26640 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VARSP26640 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VARSP26640 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 Y_RNA.48-201ENST00000362710 103 ntBASIC6.12□□□□□ -1.43
VARSP26640 Y_RNA.54-201ENST00000362766 105 ntBASIC6.12□□□□□ -1.43
VARSP26640 RNY1-201ENST00000364228 113 ntBASIC6.12□□□□□ -1.43
VARSP26640 RNA5SP431-201ENST00000410312 120 ntBASIC6.12□□□□□ -1.43
VARSP26640 RNU2-33P-201ENST00000410344 192 ntBASIC6.12□□□□□ -1.43
VARSP26640 SYF2P2-201ENST00000417620 583 ntBASIC6.12□□□□□ -1.43
VARSP26640 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VARSP26640 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC073410.1-201ENST00000435125 589 ntBASIC6.12□□□□□ -1.43
VARSP26640 ATP5LP2-201ENST00000440646 311 ntBASIC6.12□□□□□ -1.43
VARSP26640 FHP1-201ENST00000442741 703 ntBASIC6.12□□□□□ -1.43
VARSP26640 HMGN1P2-201ENST00000445197 310 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARSP26640 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.12□□□□□ -1.43
VARSP26640 RN7SL39P-201ENST00000462264 297 ntBASIC6.12□□□□□ -1.43
VARSP26640 RPL21P6-201ENST00000479171 504 ntBASIC6.12□□□□□ -1.43
VARSP26640 RN7SL432P-201ENST00000484057 298 ntBASIC6.12□□□□□ -1.43
VARSP26640 GM2AP2-201ENST00000491764 562 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC135721.1-201ENST00000497954 479 ntBASIC6.12□□□□□ -1.43
VARSP26640 COX7A2P2-201ENST00000505291 250 ntBASIC6.12□□□□□ -1.43
VARSP26640 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.12□□□□□ -1.43
VARSP26640 RNU4-71P-201ENST00000516258 113 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC060775.1-201ENST00000518241 520 ntBASIC6.12□□□□□ -1.43
VARSP26640 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.12□□□□□ -1.43
VARSP26640 AC012339.2-201ENST00000523996 453 ntBASIC6.12□□□□□ -1.43
VARSP26640 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VARSP26640 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.12□□□□□ -1.43
VARSP26640 AC007494.1-201ENST00000562293 760 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms