Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.03□□□□□ -1.6
SNRPA1P09661 AL133241.1-201ENST00000556832 487 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 AC018552.3-201ENST00000567416 561 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AC069304.2-201ENST00000605154 435 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AP002360.4-201ENST00000606980 481 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AL031666.3-201ENST00000609320 1006 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AL355073.2-201ENST00000612106 557 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 AC018816.2-201ENST00000621460 353 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 AC026634.1-201ENST00000634369 198 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.03□□□□□ -1.6
SNRPA1P09661 MTCO1P14-201ENST00000441695 1559 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 MAPK10-372ENST00000641954 3413 ntBASIC5.03□□□□□ -1.6
SNRPA1P09661 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNRPA1P09661 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 TEX21P-201ENST00000447107 1476 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 ZNF285B-201ENST00000561698 1767 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.02□□□□□ -1.61
SNRPA1P09661 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SNRPA1P09661 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC009237.2-201ENST00000421358 284 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 OR4F13P-201ENST00000428478 931 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.02□□□□□ -1.61
SNRPA1P09661 MTND2P20-201ENST00000440805 661 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 RNU6-1218P-201ENST00000458990 108 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.02□□□□□ -1.61
SNRPA1P09661 RNU6-202P-201ENST00000515998 96 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 RNU1-95P-201ENST00000516357 160 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 RNU1-128P-201ENST00000516704 160 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC136619.2-201ENST00000563361 631 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC087481.2-201ENST00000565492 330 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 CYP4A43P-201ENST00000568156 121 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.02□□□□□ -1.61
SNRPA1P09661 AC024220.1-201ENST00000603675 484 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC006566.1-201ENST00000608943 513 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 AC073534.2-201ENST00000620377 381 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 SCN1A-220ENST00000641603 12506 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SNRPA1P09661 ZNF37BP-203ENST00000452306 1352 ntBASIC5.02□□□□□ -1.61
SNRPA1P09661 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.02□□□□□ -1.61
SNRPA1P09661 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNRPA1P09661 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNRPA1P09661 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNRPA1P09661 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC016716.1-201ENST00000265882 708 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SNRPA1P09661 RNU6-216P-201ENST00000363282 104 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 RNU6-723P-201ENST00000383973 107 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 RNU6-1042P-201ENST00000384204 107 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 AL121878.1-201ENST00000418638 859 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.01□□□□□ -1.61
SNRPA1P09661 RPS20P1-201ENST00000434853 354 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 RPS26P40-201ENST00000435209 294 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 RPL12P46-201ENST00000436610 195 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 AL831737.1-201ENST00000441288 271 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 RPS15AP1-201ENST00000457423 391 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 RPS26P28-201ENST00000470806 348 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC025881.1-201ENST00000518851 512 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 IGHV3-32-201ENST00000519182 355 ntBASIC5.01□□□□□ -1.61
SNRPA1P09661 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.01□□□□□ -1.61
SNRPA1P09661 AC234778.2-201ENST00000566241 354 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms