Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 CD24P4-201ENST00000382840 243 ntBASIC3.25□□□□□ -1.89
TPM1P09493 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TPM1P09493 RNU4-47P-201ENST00000410876 114 ntBASIC3.25□□□□□ -1.89
TPM1P09493 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM1P09493 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
TPM1P09493 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM1P09493 AL513321.1-201ENST00000441175 761 ntBASIC3.25□□□□□ -1.89
TPM1P09493 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM1P09493 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 RPL9P33-201ENST00000484311 566 ntBASIC3.25□□□□□ -1.89
TPM1P09493 ARL4AP2-201ENST00000507378 601 ntBASIC3.25□□□□□ -1.89
TPM1P09493 KLHL2P1-201ENST00000508691 521 ntBASIC3.25□□□□□ -1.89
TPM1P09493 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.25□□□□□ -1.89
TPM1P09493 AC026412.2-201ENST00000512270 1075 ntBASIC3.25□□□□□ -1.89
TPM1P09493 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
TPM1P09493 ERHP1-201ENST00000523006 310 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC083923.1-201ENST00000523708 376 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 AP000857.1-201ENST00000532151 543 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.25□□□□□ -1.89
TPM1P09493 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 AL360181.4-201ENST00000621752 134 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC010338.1-201ENST00000621823 717 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AP003122.6-201ENST00000623831 495 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC018692.3-201ENST00000623929 123 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AP000676.4-201ENST00000624659 623 ntBASIC3.25□□□□□ -1.89
TPM1P09493 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.25□□□□□ -1.89
TPM1P09493 AC083865.1-201ENST00000636634 831 ntBASIC3.25□□□□□ -1.89
TPM1P09493 AC068620.4-201ENST00000636730 1182 ntBASIC3.25□□□□□ -1.89
TPM1P09493 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TPM1P09493 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TPM1P09493 AL049781.1-201ENST00000623195 3585 ntBASIC3.25□□□□□ -1.89
TPM1P09493 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TPM1P09493 AL161431.1-201ENST00000618966 4205 ntBASIC3.24□□□□□ -1.89
TPM1P09493 OR5BR1P-201ENST00000524992 1330 ntBASIC3.24□□□□□ -1.89
TPM1P09493 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TPM1P09493 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
TPM1P09493 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TPM1P09493 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RNU6-1249P-201ENST00000363237 111 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RNU1-64P-201ENST00000365443 163 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RNU6-761P-201ENST00000384148 107 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RNU6-40P-201ENST00000384254 107 ntBASIC3.24□□□□□ -1.89
TPM1P09493 U3.19-201ENST00000390893 196 ntBASIC3.24□□□□□ -1.89
TPM1P09493 MIR1193-201ENST00000408109 78 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RNA5SP38-201ENST00000410750 119 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AL353678.1-201ENST00000422735 741 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC091286.1-201ENST00000431233 461 ntBASIC3.24□□□□□ -1.89
TPM1P09493 RPL23AP20-201ENST00000447965 421 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC068587.1-201ENST00000483613 781 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.24□□□□□ -1.89
TPM1P09493 OR4A45P-201ENST00000529954 901 ntBASIC3.24□□□□□ -1.89
TPM1P09493 ELOCP31-201ENST00000540463 467 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AL391156.1-201ENST00000554965 554 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC027104.1-201ENST00000563702 681 ntBASIC3.24□□□□□ -1.89
TPM1P09493 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AL355812.1-201ENST00000603215 216 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC068831.8-201ENST00000620171 435 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AC092608.3-201ENST00000625017 386 ntBASIC3.24□□□□□ -1.89
TPM1P09493 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
TPM1P09493 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TPM1P09493 RNU6-989P-201ENST00000362756 107 ntBASIC3.23□□□□□ -1.89
TPM1P09493 RNU6-1151P-201ENST00000384684 107 ntBASIC3.23□□□□□ -1.89
TPM1P09493 MIR490-201ENST00000384865 128 ntBASIC3.23□□□□□ -1.89
TPM1P09493 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TPM1P09493 FABP12P1-201ENST00000401911 322 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC008280.1-201ENST00000418851 412 ntBASIC3.23□□□□□ -1.89
TPM1P09493 DUTP6-201ENST00000425573 462 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM1P09493 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM1P09493 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TPM1P09493 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM1P09493 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TPM1P09493 PDSS1P2-201ENST00000449397 678 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC020898.1-201ENST00000474167 787 ntBASIC3.23□□□□□ -1.89
TPM1P09493 OR9N1P-202ENST00000494289 481 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM1P09493 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TPM1P09493 AC024341.1-201ENST00000526444 1552 ntBASIC3.23□□□□□ -1.89
TPM1P09493 OSBPL9P3-201ENST00000534523 595 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.23□□□□□ -1.89
TPM1P09493 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.23□□□□□ -1.89
TPM1P09493 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM1P09493 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.23□□□□□ -1.89
TPM1P09493 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AL356863.1-201ENST00000623378 1080 ntBASIC3.23□□□□□ -1.89
TPM1P09493 AC009039.2-201ENST00000624524 529 ntBASIC3.23□□□□□ -1.89
TPM1P09493 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TPM1P09493 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TPM1P09493 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
TPM1P09493 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
TPM1P09493 ASNSP3-201ENST00000451989 1306 ntBASIC3.22□□□□□ -1.89
TPM1P09493 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM1P09493 SGO1P2-201ENST00000429458 1589 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms