Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC025768.1-201ENST00000510057 267 ntBASIC3.27□□□□□ -1.89
RETP07949 AC008494.2-201ENST00000514544 370 ntBASIC3.27□□□□□ -1.89
RETP07949 RNU6-467P-201ENST00000517027 110 ntBASIC3.27□□□□□ -1.89
RETP07949 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
RETP07949 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.27□□□□□ -1.89
RETP07949 AC090616.5-202ENST00000582111 297 ntBASIC3.27□□□□□ -1.89
RETP07949 AL392112.1-201ENST00000605115 829 ntBASIC3.27□□□□□ -1.89
RETP07949 AP003485.2-201ENST00000623636 610 ntBASIC3.27□□□□□ -1.89
RETP07949 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
RETP07949 AC073476.4-201ENST00000628409 72 ntBASIC3.27□□□□□ -1.89
RETP07949 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 AC017071.1-201ENST00000564407 2204 ntBASIC3.27□□□□□ -1.89
RETP07949 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RETP07949 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RETP07949 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
RETP07949 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RETP07949 SNORA40.4-201ENST00000390971 128 ntBASIC3.26□□□□□ -1.89
RETP07949 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.26□□□□□ -1.89
RETP07949 NDUFB4P5-201ENST00000415445 361 ntBASIC3.26□□□□□ -1.89
RETP07949 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RETP07949 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.26□□□□□ -1.89
RETP07949 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 RNFT1P2-201ENST00000443064 757 ntBASIC3.26□□□□□ -1.89
RETP07949 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.26□□□□□ -1.89
RETP07949 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
RETP07949 MTND2P30-201ENST00000456663 382 ntBASIC3.26□□□□□ -1.89
RETP07949 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
RETP07949 MTND3P24-201ENST00000506306 329 ntBASIC3.26□□□□□ -1.89
RETP07949 RPL7L1P13-201ENST00000511702 739 ntBASIC3.26□□□□□ -1.89
RETP07949 AC133963.2-201ENST00000513686 578 ntBASIC3.26□□□□□ -1.89
RETP07949 RNA5SP356-201ENST00000515972 94 ntBASIC3.26□□□□□ -1.89
RETP07949 RN7SKP244-201ENST00000516513 307 ntBASIC3.26□□□□□ -1.89
RETP07949 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
RETP07949 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 AC103881.1-201ENST00000603476 538 ntBASIC3.26□□□□□ -1.89
RETP07949 AL671309.1-201ENST00000603750 544 ntBASIC3.26□□□□□ -1.89
RETP07949 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.26□□□□□ -1.89
RETP07949 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.26□□□□□ -1.89
RETP07949 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RETP07949 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.26□□□□□ -1.89
RETP07949 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RETP07949 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
RETP07949 MTND5P7-201ENST00000413558 1798 ntBASIC3.25□□□□□ -1.89
RETP07949 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RETP07949 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
RETP07949 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RETP07949 RNU6-543P-201ENST00000362576 108 ntBASIC3.25□□□□□ -1.89
RETP07949 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
RETP07949 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.25□□□□□ -1.89
RETP07949 RNU2-21P-201ENST00000410368 188 ntBASIC3.25□□□□□ -1.89
RETP07949 TATDN1P1-201ENST00000414123 891 ntBASIC3.25□□□□□ -1.89
RETP07949 PNRC2P1-201ENST00000423940 420 ntBASIC3.25□□□□□ -1.89
RETP07949 AL513175.1-201ENST00000431492 780 ntBASIC3.25□□□□□ -1.89
RETP07949 VDAC1P3-201ENST00000434069 851 ntBASIC3.25□□□□□ -1.89
RETP07949 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.25□□□□□ -1.89
RETP07949 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
RETP07949 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.25□□□□□ -1.89
RETP07949 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.25□□□□□ -1.89
RETP07949 RPL7P52-201ENST00000449200 742 ntBASIC3.25□□□□□ -1.89
RETP07949 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.25□□□□□ -1.89
RETP07949 AC010468.3-201ENST00000508225 458 ntBASIC3.25□□□□□ -1.89
RETP07949 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.25□□□□□ -1.89
RETP07949 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
RETP07949 RN7SKP283-201ENST00000517197 270 ntBASIC3.25□□□□□ -1.89
RETP07949 AC008562.1-201ENST00000521763 330 ntBASIC3.25□□□□□ -1.89
RETP07949 COX6B1P6-201ENST00000522347 255 ntBASIC3.25□□□□□ -1.89
RETP07949 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.25□□□□□ -1.89
RETP07949 AC034268.2-201ENST00000571784 482 ntBASIC3.25□□□□□ -1.89
RETP07949 AL390838.2-201ENST00000602394 274 ntBASIC3.25□□□□□ -1.89
RETP07949 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.25□□□□□ -1.89
RETP07949 AL356321.1-201ENST00000621360 228 ntBASIC3.25□□□□□ -1.89
RETP07949 AP000720.1-201ENST00000625091 483 ntBASIC3.25□□□□□ -1.89
RETP07949 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RETP07949 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RETP07949 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RETP07949 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RETP07949 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.25□□□□□ -1.89
RETP07949 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RETP07949 FAM35BP-202ENST00000497389 3337 ntBASIC3.24□□□□□ -1.89
RETP07949 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RETP07949 OR5J1P-201ENST00000313544 939 ntBASIC3.24□□□□□ -1.89
RETP07949 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
RETP07949 RNU6-650P-201ENST00000365658 111 ntBASIC3.24□□□□□ -1.89
RETP07949 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RETP07949 RNU6-1293P-201ENST00000384077 107 ntBASIC3.24□□□□□ -1.89
RETP07949 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
RETP07949 AL445183.3-201ENST00000414168 502 ntBASIC3.24□□□□□ -1.89
RETP07949 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.24□□□□□ -1.89
RETP07949 AC241520.1-201ENST00000422654 1099 ntBASIC3.24□□□□□ -1.89
RETP07949 AC073508.1-201ENST00000428866 656 ntBASIC3.24□□□□□ -1.89
RETP07949 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
RETP07949 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms