Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC008083.4-201ENST00000615076 444 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 SNORD39.4-201ENST00000620099 78 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 FP236240.3-201ENST00000623061 327 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC026634.1-201ENST00000634369 198 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MTND2P41-201ENST00000637599 773 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MFSD8-245ENST00000641743 948 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 MTND5P7-201ENST00000413558 1798 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.53□□□□□ -2.01
HLA-DQA1P01909 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RNU6-1249P-201ENST00000363237 111 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 ARF4P3-201ENST00000397387 509 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AL079342.2-201ENST00000403367 482 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 MIR1193-201ENST00000408109 78 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 NIPA2P1-201ENST00000426223 976 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SEPT7P5-201ENST00000434048 306 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 VDAC1P3-201ENST00000434069 851 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC092393.1-201ENST00000439625 742 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 HMGB3P6-201ENST00000444896 598 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC004022.1-201ENST00000447766 1066 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC112492.1-201ENST00000449607 712 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC104308.1-201ENST00000454621 333 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC103987.1-201ENST00000473394 348 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC104982.1-201ENST00000478775 574 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC013828.1-201ENST00000481845 158 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC093767.1-201ENST00000504523 156 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 HMGN1P11-201ENST00000508668 303 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RNU6-352P-201ENST00000516908 107 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SNORA31.20-201ENST00000517111 133 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 DEFB130C-202ENST00000530001 230 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SULT1C2P1-202ENST00000562418 459 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC087481.2-201ENST00000565492 330 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 LARP7P2-201ENST00000575306 125 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC005951.1-201ENST00000576706 485 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC087499.8-201ENST00000578406 226 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC091946.2-201ENST00000606105 291 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SNORA51-201ENST00000606420 132 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC099676.1-201ENST00000608886 657 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC093673.2-201ENST00000609674 331 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RNU6-1192P-201ENST00000612197 107 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RNU6-489P-201ENST00000618289 107 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC069209.1-201ENST00000619282 651 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC009318.4-201ENST00000620496 486 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AL354798.1-201ENST00000622505 329 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AL157770.1-201ENST00000623049 439 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC040168.1-201ENST00000623594 991 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC092184.1-201ENST00000625042 715 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 AC084035.1-201ENST00000634543 607 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-DQA1P01909 DBF4P1-201ENST00000412976 1892 ntBASIC2.52□□□□□ -2.01
HLA-DQA1P01909 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 ANKRD36P1-201ENST00000344424 659 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RNA5SP479-201ENST00000364858 117 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 SNORD65.1-201ENST00000390889 71 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RNU6-1176P-201ENST00000390955 107 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RNU6-837P-201ENST00000391056 108 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DQA1P01909 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 MTCO1P56-201ENST00000401674 224 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 SNORA3.3-201ENST00000408712 125 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 RN7SKP156-201ENST00000410308 342 ntBASIC2.51□□□□□ -2.01
HLA-DQA1P01909 Z99755.1-201ENST00000414048 380 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms