Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RN7SKP234-201ENST00000517173 224 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 OR5AK1P-201ENST00000524837 922 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AP000790.1-201ENST00000528891 737 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 PARP1P2-201ENST00000556806 195 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC012435.1-202ENST00000568772 240 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 MIR4697-201ENST00000582977 78 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 SNORD39.3-201ENST00000584451 71 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 MIR6716-201ENST00000613413 80 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLPTM1O96005 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLPTM1O96005 AC024560.2-201ENST00000507981 1497 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLPTM1O96005 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
CLPTM1O96005 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.65□□□□□ -1.83
CLPTM1O96005 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLPTM1O96005 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CLPTM1O96005 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 RNU6-251P-201ENST00000363235 104 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 Y_RNA.318-201ENST00000365131 97 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 RNU5A-2P-201ENST00000384337 116 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 MIR1284-201ENST00000408337 120 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 RNU2-28P-201ENST00000410457 189 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 PIGPP2-201ENST00000411569 458 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 BX119904.4-201ENST00000424402 301 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 RSL24D1P6-201ENST00000426934 401 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 THAP5P1-201ENST00000439089 262 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC073387.1-201ENST00000453261 709 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC006539.3-201ENST00000454258 129 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 TRBV12-2-201ENST00000489763 344 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC104685.1-201ENST00000502445 371 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 MTCYBP17-201ENST00000503579 789 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC005178.1-201ENST00000508392 440 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC093824.1-201ENST00000508796 343 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 XKRY-201ENST00000510392 1100 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 SUMO2P20-201ENST00000520803 283 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC090502.2-201ENST00000549267 280 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 MIR3915-201ENST00000578518 97 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.64□□□□□ -1.83
CLPTM1O96005 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 AL161729.3-201ENST00000603533 673 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AP000811.1-201ENST00000603803 651 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 DUXAP11-201ENST00000603858 526 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC105129.3-201ENST00000605455 485 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AL451064.1-201ENST00000607718 471 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 FAM27D1-201ENST00000612308 341 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AC073530.2-201ENST00000623987 261 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC098679.5-201ENST00000624394 571 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 AC091965.5-201ENST00000624785 342 ntBASIC3.64□□□□□ -1.83
CLPTM1O96005 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLPTM1O96005 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLPTM1O96005 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
CLPTM1O96005 AL445523.1-201ENST00000451184 1362 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 LARP1BP1-201ENST00000506036 1359 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 MTND4P34-201ENST00000572715 1371 ntBASIC3.63□□□□□ -1.83
CLPTM1O96005 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLPTM1O96005 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLPTM1O96005 MTND5P3-201ENST00000438536 1800 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms