Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR3690-201ENST00000580266 75 ntBASIC3.49□□□□□ -1.85
MBD3O95983 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
MBD3O95983 AC006504.3-201ENST00000586818 523 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AL669831.4-202ENST00000590817 238 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AC103881.1-201ENST00000603476 538 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AL158211.2-201ENST00000607282 395 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AC090425.2-201ENST00000608818 501 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AC107871.2-201ENST00000612894 502 ntBASIC3.49□□□□□ -1.85
MBD3O95983 VN1R7P-201ENST00000619242 903 ntBASIC3.49□□□□□ -1.85
MBD3O95983 XIST_intron.1-201ENST00000619444 68 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AC006249.1-201ENST00000621223 471 ntBASIC3.49□□□□□ -1.85
MBD3O95983 AL512506.2-201ENST00000624472 458 ntBASIC3.49□□□□□ -1.85
MBD3O95983 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MBD3O95983 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
MBD3O95983 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MBD3O95983 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
MBD3O95983 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MBD3O95983 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MBD3O95983 AC130650.2-201ENST00000618736 2403 ntBASIC3.49□□□□□ -1.85
MBD3O95983 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
MBD3O95983 AC073325.2-201ENST00000339545 159 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC234772.1-201ENST00000377927 937 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RNU6-339P-201ENST00000384310 107 ntBASIC3.48□□□□□ -1.85
MBD3O95983 SNORD116-23-201ENST00000384645 92 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RN7SKP159-201ENST00000410657 292 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RNU6-575P-201ENST00000411326 105 ntBASIC3.48□□□□□ -1.85
MBD3O95983 BX323014.1-201ENST00000412876 237 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC027644.1-201ENST00000419595 298 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.48□□□□□ -1.85
MBD3O95983 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.48□□□□□ -1.85
MBD3O95983 MTCYBP15-201ENST00000433123 1127 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RPS29P6-201ENST00000438196 145 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC241584.1-201ENST00000438469 1241 ntBASIC3.48□□□□□ -1.85
MBD3O95983 RPL23AP16-201ENST00000441715 421 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
MBD3O95983 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD3O95983 GSTA11P-201ENST00000452866 669 ntBASIC3.48□□□□□ -1.85
MBD3O95983 TRBV26-201ENST00000456572 344 ntBASIC3.48□□□□□ -1.85
MBD3O95983 MTCO3P2-201ENST00000457365 171 ntBASIC3.48□□□□□ -1.85
MBD3O95983 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.48□□□□□ -1.85
MBD3O95983 KLRA1P-201ENST00000503499 986 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD3O95983 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD3O95983 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
MBD3O95983 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.48□□□□□ -1.85
MBD3O95983 AC007536.1-201ENST00000533382 349 ntBASIC3.48□□□□□ -1.85
MBD3O95983 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.48□□□□□ -1.85
MBD3O95983 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.48□□□□□ -1.85
MBD3O95983 VN1R87P-201ENST00000596706 487 ntBASIC3.48□□□□□ -1.85
MBD3O95983 AC006023.2-201ENST00000609916 167 ntBASIC3.48□□□□□ -1.85
MBD3O95983 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.48□□□□□ -1.85
MBD3O95983 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
MBD3O95983 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
MBD3O95983 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MBD3O95983 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MBD3O95983 RNU6-374P-201ENST00000364146 108 ntBASIC3.47□□□□□ -1.85
MBD3O95983 MIR218-2-201ENST00000385006 110 ntBASIC3.47□□□□□ -1.85
MBD3O95983 SNORA40.4-201ENST00000390971 128 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD3O95983 MTATP6P19-201ENST00000413797 659 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD3O95983 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MBD3O95983 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 ARF4P4-201ENST00000439608 520 ntBASIC3.47□□□□□ -1.85
MBD3O95983 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 AC093801.2-201ENST00000503966 1050 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AC011352.3-201ENST00000505162 593 ntBASIC3.47□□□□□ -1.85
MBD3O95983 HMGB1P22-201ENST00000505315 124 ntBASIC3.47□□□□□ -1.85
MBD3O95983 HMGN1P15-201ENST00000513870 295 ntBASIC3.47□□□□□ -1.85
MBD3O95983 ZNF705CP-201ENST00000530515 889 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD3O95983 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD3O95983 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD3O95983 AC034105.3-201ENST00000565294 442 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
MBD3O95983 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.47□□□□□ -1.85
MBD3O95983 PRELID3BP8-201ENST00000604148 295 ntBASIC3.47□□□□□ -1.85
MBD3O95983 AL121772.2-201ENST00000614331 297 ntBASIC3.47□□□□□ -1.85
MBD3O95983 MIR6733-201ENST00000635723 61 ntBASIC3.47□□□□□ -1.85
MBD3O95983 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.47□□□□□ -1.85
MBD3O95983 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
MBD3O95983 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MBD3O95983 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
MBD3O95983 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.46□□□□□ -1.85
MBD3O95983 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
MBD3O95983 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MBD3O95983 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.46□□□□□ -1.86
MBD3O95983 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD3O95983 AP001350.1-201ENST00000601906 1524 ntBASIC3.46□□□□□ -1.86
MBD3O95983 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.46□□□□□ -1.86
MBD3O95983 RNU6-839P-201ENST00000363347 108 ntBASIC3.46□□□□□ -1.86
MBD3O95983 MTND4LP20-201ENST00000402379 270 ntBASIC3.46□□□□□ -1.86
MBD3O95983 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms