Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX3O95343 AL356320.2-201ENST00000417263 507 ntBASIC3.69□□□□□ -1.82
SIX3O95343 TIMM9P2-201ENST00000419324 266 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 AL513175.2-201ENST00000422071 443 ntBASIC3.69□□□□□ -1.82
SIX3O95343 ATP5F1P1-201ENST00000433775 569 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC007389.2-201ENST00000434630 306 ntBASIC3.69□□□□□ -1.82
SIX3O95343 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX3O95343 MTND2P20-201ENST00000440805 661 ntBASIC3.69□□□□□ -1.82
SIX3O95343 HSPE1P28-201ENST00000443139 211 ntBASIC3.69□□□□□ -1.82
SIX3O95343 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX3O95343 AC005297.2-201ENST00000450430 606 ntBASIC3.69□□□□□ -1.82
SIX3O95343 USP9YP34-201ENST00000453983 808 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 snoU109.4-201ENST00000458953 143 ntBASIC3.69□□□□□ -1.82
SIX3O95343 MTCO3P35-201ENST00000485582 781 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AL024509.2-201ENST00000493462 493 ntBASIC3.69□□□□□ -1.82
SIX3O95343 GTF2IP9-201ENST00000502460 301 ntBASIC3.69□□□□□ -1.82
SIX3O95343 TRAV31-201ENST00000502780 342 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.69□□□□□ -1.82
SIX3O95343 SNORA70.14-201ENST00000516205 110 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC008802.1-201ENST00000519121 791 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX3O95343 AC022861.1-201ENST00000522981 663 ntBASIC3.69□□□□□ -1.82
SIX3O95343 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.69□□□□□ -1.82
SIX3O95343 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.69□□□□□ -1.82
SIX3O95343 AC006518.1-201ENST00000541449 943 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AL049838.1-201ENST00000563647 981 ntBASIC3.69□□□□□ -1.82
SIX3O95343 DUXAP3-201ENST00000603616 594 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC009220.3-201ENST00000604318 586 ntBASIC3.69□□□□□ -1.82
SIX3O95343 SNORA62.6-201ENST00000606322 83 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC131235.4-201ENST00000609288 620 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC090897.3-201ENST00000636973 1157 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SIX3O95343 AC073073.2-201ENST00000609827 2578 ntBASIC3.69□□□□□ -1.82
SIX3O95343 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.69□□□□□ -1.82
SIX3O95343 MAPK10-373ENST00000641983 6772 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AL161912.2-201ENST00000565707 3007 ntBASIC3.69□□□□□ -1.82
SIX3O95343 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
SIX3O95343 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SIX3O95343 AL356473.1-201ENST00000406203 1408 ntBASIC3.69□□□□□ -1.82
SIX3O95343 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX3O95343 OTUD4P1-201ENST00000237841 3067 ntBASIC3.68□□□□□ -1.82
SIX3O95343 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX3O95343 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX3O95343 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX3O95343 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX3O95343 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SIX3O95343 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SIX3O95343 SOD2P1-201ENST00000396543 562 ntBASIC3.68□□□□□ -1.82
SIX3O95343 RNU6ATAC-201ENST00000408749 126 ntBASIC3.68□□□□□ -1.82
SIX3O95343 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX3O95343 AC069157.1-201ENST00000421749 137 ntBASIC3.68□□□□□ -1.82
SIX3O95343 SKP1P1-201ENST00000438081 489 ntBASIC3.68□□□□□ -1.82
SIX3O95343 MUPP-201ENST00000438111 566 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AL662791.1-201ENST00000441992 928 ntBASIC3.68□□□□□ -1.82
SIX3O95343 HMGN2P7-201ENST00000456186 273 ntBASIC3.68□□□□□ -1.82
SIX3O95343 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX3O95343 AC114322.1-201ENST00000506771 926 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC116353.3-201ENST00000511215 249 ntBASIC3.68□□□□□ -1.82
SIX3O95343 NDUFB4P9-201ENST00000511646 388 ntBASIC3.68□□□□□ -1.82
SIX3O95343 RPL23AP94-201ENST00000512518 302 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC108064.1-201ENST00000513791 460 ntBASIC3.68□□□□□ -1.82
SIX3O95343 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC104986.1-201ENST00000517978 436 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX3O95343 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX3O95343 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX3O95343 AC087481.2-201ENST00000565492 330 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX3O95343 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 OR4K7P-201ENST00000580232 945 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AP001029.3-201ENST00000588063 596 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 AC245036.5-201ENST00000596330 847 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX3O95343 AL031176.1-201ENST00000604554 466 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC106052.1-201ENST00000608029 497 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC084757.4-201ENST00000616350 526 ntBASIC3.68□□□□□ -1.82
SIX3O95343 AC116618.1-201ENST00000634617 774 ntBASIC3.68□□□□□ -1.82
SIX3O95343 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SIX3O95343 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX3O95343 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
SIX3O95343 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX3O95343 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX3O95343 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
SIX3O95343 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX3O95343 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
SIX3O95343 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX3O95343 Y_RNA.408-201ENST00000383987 102 ntBASIC3.67□□□□□ -1.82
SIX3O95343 RNU6-213P-201ENST00000384051 104 ntBASIC3.67□□□□□ -1.82
SIX3O95343 U1.1-201ENST00000384101 164 ntBASIC3.67□□□□□ -1.82
SIX3O95343 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms