Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VAMP4O75379 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VAMP4O75379 Y_RNA.61-201ENST00000362835 102 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 U8.3-201ENST00000363321 132 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 PRRC2CP1-201ENST00000404428 159 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC016397.1-201ENST00000412463 242 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 AL445669.1-201ENST00000426743 755 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC023347.2-201ENST00000433994 462 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 RPL12P46-201ENST00000436610 195 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.56□□□□□ -1.52
VAMP4O75379 AC099563.1-201ENST00000456086 418 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AMD1P1-201ENST00000457220 922 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 BTF3P5-201ENST00000457252 467 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 MTCO1P42-201ENST00000457379 726 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.56□□□□□ -1.52
VAMP4O75379 RN7SL303P-201ENST00000469773 251 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC087312.1-201ENST00000471411 480 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 RPS3AP14-201ENST00000483907 780 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 FAM172BP-201ENST00000487497 1089 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 STMN1P2-201ENST00000508435 439 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC104383.1-201ENST00000530297 370 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 AL352979.3-201ENST00000553515 247 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 AC090616.5-202ENST00000582111 297 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 AC007363.1-201ENST00000604736 620 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AL049634.3-201ENST00000604968 457 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC009994.1-201ENST00000606889 253 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.56□□□□□ -1.52
VAMP4O75379 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.56□□□□□ -1.52
VAMP4O75379 MIR6758-201ENST00000620653 63 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC004009.2-201ENST00000623016 728 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 AC008013.2-202ENST00000637965 364 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VAMP4O75379 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAMP4O75379 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.56□□□□□ -1.52
VAMP4O75379 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.56□□□□□ -1.52
VAMP4O75379 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VAMP4O75379 CASC19-280ENST00000642102 1351 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 AC104260.2-201ENST00000623551 3497 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC011155.1-201ENST00000316512 456 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 CBX3P1-201ENST00000325243 554 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RNA5SP175-201ENST00000364275 119 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RNU6-534P-201ENST00000364877 106 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 RPS3AP36-201ENST00000398190 775 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RN7SKP235-201ENST00000410662 305 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 GSTM3P2-201ENST00000412746 530 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.55□□□□□ -1.52
VAMP4O75379 ELOCP14-201ENST00000428070 331 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC011998.1-201ENST00000433403 117 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 MTCYBP45-201ENST00000435243 565 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RPS3AP54-201ENST00000435535 734 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.55□□□□□ -1.52
VAMP4O75379 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.55□□□□□ -1.52
VAMP4O75379 ELOCP7-201ENST00000439968 331 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 MTND5P14-201ENST00000441481 1267 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC114755.5-201ENST00000447760 831 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 MTND1P11-201ENST00000456661 876 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 MTCO3P2-201ENST00000457365 171 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.55□□□□□ -1.52
VAMP4O75379 AC091167.1-201ENST00000492017 396 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.55□□□□□ -1.52
VAMP4O75379 RNU6-507P-201ENST00000516045 100 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RNA5SP49-201ENST00000516450 115 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 RNU2-46P-201ENST00000517038 113 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 HSPA8P13-201ENST00000523715 472 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 HIGD1AP5-201ENST00000529959 259 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AP003122.4-201ENST00000530980 758 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 AL512310.1-201ENST00000548639 172 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 AL109766.1-201ENST00000555080 552 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 BNIP3P9-201ENST00000603714 553 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC112230.1-201ENST00000604342 547 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC083809.1-201ENST00000615051 472 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AC019278.1-201ENST00000623516 479 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 AP003122.6-201ENST00000623831 495 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 MIR1321-201ENST00000637766 79 ntBASIC5.55□□□□□ -1.52
VAMP4O75379 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAMP4O75379 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.55□□□□□ -1.52
VAMP4O75379 AL451142.2-201ENST00000429076 2090 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms