Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 CKS1BP1-201ENST00000555221 240 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 AC068714.1-201ENST00000559623 800 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC123786.2-201ENST00000603459 275 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC116447.1-201ENST00000613153 453 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC000123.2-201ENST00000623124 461 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC067852.7-201ENST00000623270 535 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.61□□□□□ -1.83
NPHP4O75161 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.61□□□□□ -1.83
NPHP4O75161 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPHP4O75161 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPHP4O75161 XPOTP1-201ENST00000443317 2398 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NPHP4O75161 SNORD65-201ENST00000391079 73 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPHP4O75161 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.61□□□□□ -1.83
NPHP4O75161 MTCYBP29-201ENST00000436327 1006 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 AC025181.1-201ENST00000477507 416 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 RN7SKP219-201ENST00000516825 296 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC044913.1-201ENST00000557200 430 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP4O75161 NRBF2P1-201ENST00000587407 859 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.61□□□□□ -1.83
NPHP4O75161 AC103810.6-201ENST00000606708 136 ntBASIC3.61□□□□□ -1.83
NPHP4O75161 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP4O75161 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP4O75161 AC080128.1-201ENST00000474389 1917 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 AC104454.1-201ENST00000421341 1401 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 AL353597.2-202ENST00000434901 373 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 KCTD9P5-201ENST00000504141 1170 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP4O75161 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NPHP4O75161 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.6□□□□□ -1.83
NPHP4O75161 BNIP3P8-201ENST00000597863 560 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP4O75161 AC068313.1-201ENST00000604028 1008 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHP4O75161 AP006248.2-201ENST00000623309 592 ntBASIC3.6□□□□□ -1.83
NPHP4O75161 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
NPHP4O75161 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHP4O75161 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHP4O75161 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHP4O75161 EXOC5P1-201ENST00000510543 1969 ntBASIC3.59□□□□□ -1.83
NPHP4O75161 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHP4O75161 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHP4O75161 Y_RNA.164-201ENST00000363709 102 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
NPHP4O75161 SNORA70E-201ENST00000384492 135 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 RNU6-603P-201ENST00000411403 107 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 AL392003.1-201ENST00000434394 243 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 HMGN1P8-201ENST00000463578 288 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 AL049830.2-201ENST00000480072 201 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 OR4G11P-201ENST00000492842 939 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 RN7SKP43-201ENST00000516173 320 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.59□□□□□ -1.84
NPHP4O75161 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.59□□□□□ -1.84
NPHP4O75161 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NPHP4O75161 AC128657.1-201ENST00000549459 145 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.59□□□□□ -1.84
NPHP4O75161 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NPHP4O75161 MIR3605-201ENST00000583214 100 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 VN1R9P-201ENST00000614184 867 ntBASIC3.59□□□□□ -1.84
NPHP4O75161 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
NPHP4O75161 AC109315.1-201ENST00000584143 1347 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NPHP4O75161 RN7SKP44-201ENST00000363602 316 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NPHP4O75161 RNU6-532P-201ENST00000384318 107 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHP4O75161 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHP4O75161 HMGN1P5-201ENST00000448591 263 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 IFNWP4-201ENST00000453148 294 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 AP001086.1-201ENST00000494882 321 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 POU5F1P7-201ENST00000508759 541 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 AC008676.3-201ENST00000521237 435 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP4O75161 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 MTCO2P22-201ENST00000603246 681 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 AC090953.1-201ENST00000604305 1092 ntBASIC3.58□□□□□ -1.84
NPHP4O75161 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NPHP4O75161 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP4O75161 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP4O75161 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP4O75161 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NPHP4O75161 Y_RNA.338-201ENST00000365320 114 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 RNU6-146P-201ENST00000384602 108 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 MIR92A2-201ENST00000385299 75 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 AC012498.1-201ENST00000424037 437 ntBASIC3.57□□□□□ -1.84
NPHP4O75161 RWDD4P2-201ENST00000426392 563 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms