Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 RPL23AP61-201ENST00000623642 466 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC098679.4-201ENST00000624241 654 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC091903.1-201ENST00000624322 454 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AL121594.5-201ENST00000631724 573 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1FO60840 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CACNA1FO60840 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1FO60840 MIR148B-201ENST00000362252 99 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 U3.6-201ENST00000363622 211 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AL158825.1-201ENST00000414735 521 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 BTF3P9-201ENST00000418784 283 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC006960.1-201ENST00000419980 153 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1FO60840 MTCYBP29-201ENST00000436327 1006 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.85□□□□□ -1.79
CACNA1FO60840 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 TPTE2P5-203ENST00000458118 728 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 RPS3AP43-201ENST00000479743 781 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AF186190.1-201ENST00000517470 480 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AC109446.2-201ENST00000567872 497 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AL358072.1-201ENST00000604156 575 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 AC131159.1-201ENST00000621854 213 ntBASIC3.85□□□□□ -1.79
CACNA1FO60840 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.85□□□□□ -1.79
CACNA1FO60840 AL049555.1-201ENST00000562834 1933 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CACNA1FO60840 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CACNA1FO60840 MIR128-1-201ENST00000384921 82 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 RNU4-22P-201ENST00000411058 166 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 CACYBPP1-201ENST00000438592 684 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 RPS27P5-201ENST00000444247 244 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1FO60840 AC004022.1-201ENST00000447766 1066 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 AL096803.2-201ENST00000450032 677 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1FO60840 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1FO60840 MTND3P7-201ENST00000474435 343 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 AC106872.2-201ENST00000494303 480 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1FO60840 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1FO60840 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1FO60840 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1FO60840 AC009101.1-201ENST00000568135 242 ntBASIC3.84□□□□□ -1.79
CACNA1FO60840 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1FO60840 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1FO60840 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.84□□□□□ -1.8
CACNA1FO60840 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CACNA1FO60840 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CACNA1FO60840 RNU6-1242P-201ENST00000391052 103 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 TRGV6-201ENST00000417928 299 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 OR2AS1P-201ENST00000427827 319 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 RPL12P46-201ENST00000436610 195 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC112653.1-201ENST00000443851 386 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AC068657.1-201ENST00000520807 306 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AL121603.1-201ENST00000553815 142 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.83□□□□□ -1.8
CACNA1FO60840 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AC021171.1-201ENST00000603137 706 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 OR2BH1P-201ENST00000608850 864 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC092106.3-201ENST00000611308 722 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 PART1_2.1-201ENST00000612397 250 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 RMST_5.1-201ENST00000618704 126 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AL512506.2-201ENST00000624472 458 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1FO60840 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1FO60840 SNORA18.3-201ENST00000384122 132 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 RPL7P27-201ENST00000403775 720 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 UBE2V1P11-201ENST00000411559 285 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.83□□□□□ -1.8
CACNA1FO60840 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 BOLA3P4-201ENST00000418151 400 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 USP9YP26-201ENST00000421008 661 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 MTCO3P21-201ENST00000430791 643 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms