Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
GFRA3O60609 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
GFRA3O60609 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GFRA3O60609 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA3O60609 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA3O60609 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 MAPK10-383ENST00000642032 3390 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.03□□□□□ -1.44
GFRA3O60609 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 MAPK10-287ENST00000641217 3037 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 RNU1-49P-201ENST00000363468 159 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RNU6-512P-201ENST00000364438 103 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 Y_RNA.286-201ENST00000364813 102 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 SNORD63-201ENST00000384262 68 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RNY3P4-201ENST00000384428 101 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AC016769.3-201ENST00000396562 315 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 GLULP6-201ENST00000399502 913 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 HSPA8P15-201ENST00000401676 786 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RPS4XP7-201ENST00000406274 780 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AL357139.1-201ENST00000407792 426 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AL354868.1-201ENST00000417077 482 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 PIGFP3-201ENST00000441918 722 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RAC1P7-201ENST00000445367 377 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA3O60609 RNU7-138P-201ENST00000459479 64 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RPS4XP1-201ENST00000482189 787 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AP001025.1-201ENST00000486139 332 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 RN7SL57P-201ENST00000493687 290 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 ATP5F1P5-201ENST00000526403 760 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.03□□□□□ -1.44
GFRA3O60609 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.03□□□□□ -1.44
GFRA3O60609 AL133393.1-201ENST00000603277 287 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 AL160281.1-201ENST00000605307 311 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 BRDTP1-201ENST00000605735 677 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 AL136313.1-201ENST00000624804 202 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 MIR1245B-201ENST00000636115 69 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 AC022034.1-201ENST00000512867 2156 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 RAD17P1-201ENST00000418130 2042 ntBASIC6.03□□□□□ -1.44
GFRA3O60609 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.03□□□□□ -1.44
GFRA3O60609 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GFRA3O60609 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
GFRA3O60609 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
GFRA3O60609 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
GFRA3O60609 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.02□□□□□ -1.45
GFRA3O60609 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 AL136360.1-201ENST00000503377 1900 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
GFRA3O60609 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
GFRA3O60609 Y_RNA.234-201ENST00000364409 97 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 Y_RNA.412-201ENST00000384001 104 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
GFRA3O60609 RNA5SP105-201ENST00000391123 113 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC093106.2-201ENST00000428212 385 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC092967.1-201ENST00000449016 481 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 RNU7-107P-201ENST00000459121 61 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC100832.1-201ENST00000471945 383 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AP000926.1-201ENST00000479573 241 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC021382.1-201ENST00000483523 359 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC072052.1-201ENST00000496556 306 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.02□□□□□ -1.45
GFRA3O60609 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.02□□□□□ -1.45
GFRA3O60609 RNU6-202P-201ENST00000515998 96 ntBASIC6.02□□□□□ -1.45
GFRA3O60609 RNA5SP76-201ENST00000516277 87 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms