Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CUBNO60494 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.86□□□□□ -2.11
CUBNO60494 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CUBNO60494 CR589904.2-201ENST00000612533 440 ntBASIC1.85□□□□□ -2.11
CUBNO60494 AL356266.1-201ENST00000623311 483 ntBASIC1.85□□□□□ -2.11
CUBNO60494 PHKBP1-201ENST00000450951 1951 ntBASIC1.85□□□□□ -2.11
CUBNO60494 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CUBNO60494 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CUBNO60494 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
CUBNO60494 MTCO3P11-201ENST00000455103 774 ntBASIC1.85□□□□□ -2.11
CUBNO60494 VN1R17P-201ENST00000472048 1090 ntBASIC1.85□□□□□ -2.11
CUBNO60494 AC100870.1-201ENST00000522035 505 ntBASIC1.85□□□□□ -2.11
CUBNO60494 AC126177.3-201ENST00000551839 688 ntBASIC1.85□□□□□ -2.11
CUBNO60494 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.85□□□□□ -2.11
CUBNO60494 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.85□□□□□ -2.11
CUBNO60494 AC135628.1-201ENST00000568867 534 ntBASIC1.85□□□□□ -2.11
CUBNO60494 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CUBNO60494 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.85□□□□□ -2.11
CUBNO60494 AC080125.1-201ENST00000414888 684 ntBASIC1.85□□□□□ -2.11
CUBNO60494 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.85□□□□□ -2.11
CUBNO60494 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.85□□□□□ -2.11
CUBNO60494 AC119751.1-201ENST00000513357 765 ntBASIC1.85□□□□□ -2.11
CUBNO60494 VN1R80P-201ENST00000597126 338 ntBASIC1.85□□□□□ -2.11
CUBNO60494 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.85□□□□□ -2.11
CUBNO60494 AC107871.2-201ENST00000612894 502 ntBASIC1.85□□□□□ -2.11
CUBNO60494 LINC00216-201ENST00000623548 1126 ntBASIC1.85□□□□□ -2.11
CUBNO60494 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CUBNO60494 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CUBNO60494 RPL5P13-201ENST00000462840 709 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AP000893.1-201ENST00000474462 794 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AC005840.1-201ENST00000498412 377 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AC090281.1-201ENST00000523019 276 ntBASIC1.84□□□□□ -2.11
CUBNO60494 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.84□□□□□ -2.11
CUBNO60494 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CUBNO60494 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CUBNO60494 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.84□□□□□ -2.11
CUBNO60494 RNU6-805P-201ENST00000365643 106 ntBASIC1.84□□□□□ -2.11
CUBNO60494 RNU6-1140P-201ENST00000410517 106 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AC093392.2-201ENST00000450682 337 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AC126182.1-201ENST00000478134 357 ntBASIC1.84□□□□□ -2.11
CUBNO60494 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.84□□□□□ -2.11
CUBNO60494 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.84□□□□□ -2.11
CUBNO60494 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CUBNO60494 LAP3P1-201ENST00000403648 294 ntBASIC1.84□□□□□ -2.12
CUBNO60494 AL583834.1-201ENST00000406943 343 ntBASIC1.84□□□□□ -2.12
CUBNO60494 AL034379.1-201ENST00000423216 253 ntBASIC1.84□□□□□ -2.12
CUBNO60494 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CUBNO60494 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.84□□□□□ -2.12
CUBNO60494 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.84□□□□□ -2.12
CUBNO60494 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.84□□□□□ -2.12
CUBNO60494 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.84□□□□□ -2.12
CUBNO60494 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CUBNO60494 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CUBNO60494 AC090229.1-201ENST00000590983 1609 ntBASIC1.84□□□□□ -2.12
CUBNO60494 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.83□□□□□ -2.12
CUBNO60494 RNU1-75P-201ENST00000347264 129 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AL590399.6-201ENST00000446396 307 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AC021269.2-201ENST00000532318 330 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.83□□□□□ -2.12
CUBNO60494 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CUBNO60494 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CUBNO60494 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CUBNO60494 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CUBNO60494 OR52B1P-201ENST00000316506 909 ntBASIC1.83□□□□□ -2.12
CUBNO60494 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
CUBNO60494 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CUBNO60494 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.83□□□□□ -2.12
CUBNO60494 TVP23BP2-201ENST00000455082 615 ntBASIC1.83□□□□□ -2.12
CUBNO60494 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.83□□□□□ -2.12
CUBNO60494 ELOCP31-201ENST00000540463 467 ntBASIC1.83□□□□□ -2.12
CUBNO60494 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CUBNO60494 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.83□□□□□ -2.12
CUBNO60494 AC002064.3-201ENST00000623448 346 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AC095038.3-201ENST00000634439 195 ntBASIC1.83□□□□□ -2.12
CUBNO60494 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CUBNO60494 AL136964.1-201ENST00000622038 2990 ntBASIC1.83□□□□□ -2.12
CUBNO60494 MIR221-201ENST00000385135 110 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AL355379.1-201ENST00000405542 640 ntBASIC1.83□□□□□ -2.12
CUBNO60494 LUZP4P1-201ENST00000415420 344 ntBASIC1.83□□□□□ -2.12
CUBNO60494 RAC1P5-201ENST00000512182 576 ntBASIC1.83□□□□□ -2.12
CUBNO60494 SNORA9.3-201ENST00000516383 129 ntBASIC1.83□□□□□ -2.12
CUBNO60494 SNRPGP18-201ENST00000553000 214 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AC103968.1-201ENST00000557841 573 ntBASIC1.83□□□□□ -2.12
CUBNO60494 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CUBNO60494 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.82□□□□□ -2.12
CUBNO60494 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CUBNO60494 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CUBNO60494 AL606490.7-201ENST00000433136 191 ntBASIC1.82□□□□□ -2.12
CUBNO60494 AP000857.1-201ENST00000532151 543 ntBASIC1.82□□□□□ -2.12
CUBNO60494 AC083760.1-201ENST00000589621 670 ntBASIC1.82□□□□□ -2.12
CUBNO60494 AC008121.2-201ENST00000614647 523 ntBASIC1.82□□□□□ -2.12
CUBNO60494 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CUBNO60494 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CUBNO60494 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.82□□□□□ -2.12
CUBNO60494 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.82□□□□□ -2.12
CUBNO60494 AC006272.2-201ENST00000594725 163 ntBASIC1.82□□□□□ -2.12
CUBNO60494 RMST_9.1-201ENST00000619945 193 ntBASIC1.82□□□□□ -2.12
CUBNO60494 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CUBNO60494 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
CUBNO60494 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms