Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ACTN4O43707 SETP5-201ENST00000437270 562 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 MSL3P1-202ENST00000440028 1468 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 RPL12P39-201ENST00000455456 496 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 RPL23AP31-201ENST00000456160 467 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.63□□□□□ -1.35
ACTN4O43707 SNORD121B-201ENST00000458838 81 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AC084198.1-201ENST00000477747 402 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.63□□□□□ -1.35
ACTN4O43707 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.63□□□□□ -1.35
ACTN4O43707 RNU2-69P-201ENST00000516061 100 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 IGKV3D-25-201ENST00000519599 235 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ACTN4O43707 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.63□□□□□ -1.35
ACTN4O43707 AL133271.1-201ENST00000538229 291 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.63□□□□□ -1.35
ACTN4O43707 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.63□□□□□ -1.35
ACTN4O43707 TXNP4-201ENST00000575018 310 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.63□□□□□ -1.35
ACTN4O43707 RPS29P30-201ENST00000600975 111 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AC073410.2-201ENST00000603240 332 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AL451044.1-201ENST00000604867 238 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AL590099.1-201ENST00000615276 138 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AP001282.2-201ENST00000616149 309 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ACTN4O43707 AC138907.8-201ENST00000623981 2256 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.63□□□□□ -1.35
ACTN4O43707 AC000095.2-202ENST00000637415 154 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ACTN4O43707 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ACTN4O43707 AL445437.1-201ENST00000623157 3087 ntBASIC6.63□□□□□ -1.35
ACTN4O43707 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 XIAPP3-201ENST00000312918 795 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 RN7SKP78-201ENST00000364711 318 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 MIR517A-201ENST00000385001 87 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ACTN4O43707 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 AL360081.1-201ENST00000428299 555 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 REG1CP-206ENST00000447469 496 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 RPS3AP46-201ENST00000448352 682 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 Y_RNA.644-201ENST00000459006 113 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AC094085.1-201ENST00000468914 584 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 AC113367.2-201ENST00000505749 160 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 Y_RNA.674-201ENST00000516362 113 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 SNORA25.14-201ENST00000516481 132 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 RN7SKP35-201ENST00000517210 151 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 IGKV2-19-201ENST00000518132 283 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.62□□□□□ -1.35
ACTN4O43707 MIR4420-201ENST00000583944 77 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.62□□□□□ -1.35
ACTN4O43707 AC060780.2-201ENST00000589047 198 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AL355877.2-201ENST00000603670 358 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 FAM27E4-201ENST00000605259 342 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AC004832.4-201ENST00000608952 331 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AL359547.2-201ENST00000615810 418 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 FAM27E2-201ENST00000619668 403 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 AC022400.9-201ENST00000623633 273 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 CR392039.4-201ENST00000624968 501 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.62□□□□□ -1.35
ACTN4O43707 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.62□□□□□ -1.35
ACTN4O43707 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ACTN4O43707 EXOC5P1-201ENST00000510543 1969 ntBASIC6.62□□□□□ -1.35
ACTN4O43707 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ACTN4O43707 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.62□□□□□ -1.35
ACTN4O43707 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ACTN4O43707 MFSD8-239ENST00000641590 2479 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ACTN4O43707 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.61□□□□□ -1.35
ACTN4O43707 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ACTN4O43707 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ACTN4O43707 AC012254.3-201ENST00000591183 2117 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.61□□□□□ -1.35
ACTN4O43707 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.61□□□□□ -1.35
ACTN4O43707 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ACTN4O43707 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ACTN4O43707 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
ACTN4O43707 AL391987.6-201ENST00000305671 199 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 Y_RNA.352-201ENST00000365439 102 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 SNORA51.9-201ENST00000384295 124 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 Y_RNA.471-201ENST00000384312 102 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 SNORD58.1-201ENST00000391313 66 ntBASIC6.61□□□□□ -1.35
ACTN4O43707 RNU6-1203P-201ENST00000410703 110 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms