Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU1-68P-201ENST00000615382 146 ntBASIC2.8□□□□□ -1.96
SGCEO43556 AC002076.2-201ENST00000617362 122 ntBASIC2.8□□□□□ -1.96
SGCEO43556 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.8□□□□□ -1.96
SGCEO43556 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
SGCEO43556 U1.39-201ENST00000621562 146 ntBASIC2.8□□□□□ -1.96
SGCEO43556 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.8□□□□□ -1.96
SGCEO43556 AL590396.2-201ENST00000636511 1041 ntBASIC2.8□□□□□ -1.96
SGCEO43556 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SGCEO43556 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.8□□□□□ -1.96
SGCEO43556 MAPK10-322ENST00000641485 4530 ntBASIC2.8□□□□□ -1.96
SGCEO43556 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 AC092447.7-201ENST00000422212 1621 ntBASIC2.79□□□□□ -1.96
SGCEO43556 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SGCEO43556 RNA5SP27-201ENST00000363839 119 ntBASIC2.79□□□□□ -1.96
SGCEO43556 RNU1-85P-201ENST00000364127 164 ntBASIC2.79□□□□□ -1.96
SGCEO43556 MIR670-201ENST00000390142 98 ntBASIC2.79□□□□□ -1.96
SGCEO43556 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SGCEO43556 U3.19-201ENST00000390893 196 ntBASIC2.79□□□□□ -1.96
SGCEO43556 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 ATP5F1P6-201ENST00000402768 767 ntBASIC2.79□□□□□ -1.96
SGCEO43556 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.79□□□□□ -1.96
SGCEO43556 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.79□□□□□ -1.96
SGCEO43556 MTND4P24-201ENST00000424002 397 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC005189.1-201ENST00000431286 310 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.79□□□□□ -1.96
SGCEO43556 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.79□□□□□ -1.96
SGCEO43556 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
SGCEO43556 RPL23AP23-201ENST00000452590 471 ntBASIC2.79□□□□□ -1.96
SGCEO43556 DNAJC19P8-201ENST00000452887 259 ntBASIC2.79□□□□□ -1.96
SGCEO43556 ST13P14-201ENST00000474095 734 ntBASIC2.79□□□□□ -1.96
SGCEO43556 RPL21P129-201ENST00000491732 478 ntBASIC2.79□□□□□ -1.96
SGCEO43556 OR5H3P-201ENST00000502817 919 ntBASIC2.79□□□□□ -1.96
SGCEO43556 WBP1LP4-201ENST00000505043 344 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.79□□□□□ -1.96
SGCEO43556 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.79□□□□□ -1.96
SGCEO43556 SNORA31.1-201ENST00000515993 133 ntBASIC2.79□□□□□ -1.96
SGCEO43556 SNORA31.5-201ENST00000516190 133 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AP001207.2-201ENST00000519490 539 ntBASIC2.79□□□□□ -1.96
SGCEO43556 ERHP1-201ENST00000523006 310 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.79□□□□□ -1.96
SGCEO43556 OR8K4P-201ENST00000534608 872 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.79□□□□□ -1.96
SGCEO43556 AC025918.2-201ENST00000558683 763 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC087481.2-201ENST00000565492 330 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC055876.1-202ENST00000567053 138 ntBASIC2.79□□□□□ -1.96
SGCEO43556 MIR4429-201ENST00000580105 73 ntBASIC2.79□□□□□ -1.96
SGCEO43556 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
SGCEO43556 AC012254.4-201ENST00000588843 273 ntBASIC2.79□□□□□ -1.96
SGCEO43556 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.79□□□□□ -1.96
SGCEO43556 AC095031.1-201ENST00000623685 672 ntBASIC2.79□□□□□ -1.96
SGCEO43556 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.79□□□□□ -1.96
SGCEO43556 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SGCEO43556 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SGCEO43556 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AP002907.1-201ENST00000606361 1430 ntBASIC2.78□□□□□ -1.96
SGCEO43556 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 OR1S2-201ENST00000302592 978 ntBASIC2.78□□□□□ -1.96
SGCEO43556 SNORD51.1-201ENST00000365405 77 ntBASIC2.78□□□□□ -1.96
SGCEO43556 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 RNU6-441P-201ENST00000384545 106 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL357075.1-201ENST00000404107 726 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 YME1L1P1-201ENST00000429435 297 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC109583.1-201ENST00000432156 268 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 MTCYBP34-201ENST00000439552 670 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.78□□□□□ -1.96
SGCEO43556 RAB11AP1-201ENST00000442978 646 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 ELOCP23-201ENST00000452014 332 ntBASIC2.78□□□□□ -1.96
SGCEO43556 PRSS3P4-201ENST00000453323 162 ntBASIC2.78□□□□□ -1.96
SGCEO43556 BX248409.1-201ENST00000455497 255 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.78□□□□□ -1.96
SGCEO43556 AC104472.2-201ENST00000469035 601 ntBASIC2.78□□□□□ -1.96
SGCEO43556 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SGCEO43556 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 ARL4AP2-201ENST00000507378 601 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC026412.2-201ENST00000512270 1075 ntBASIC2.78□□□□□ -1.96
SGCEO43556 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
SGCEO43556 HIGD1AP6-201ENST00000521833 279 ntBASIC2.78□□□□□ -1.96
SGCEO43556 CCNG2P1-201ENST00000549521 1000 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.78□□□□□ -1.96
SGCEO43556 AL391156.1-201ENST00000554965 554 ntBASIC2.78□□□□□ -1.96
SGCEO43556 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms