Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
LRRTM2O43300 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 RNU6-906P-201ENST00000384700 70 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LRRTM2O43300 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRTM2O43300 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 RNA5SP129-201ENST00000410276 118 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL592310.1-201ENST00000414330 671 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 OR4K6P-201ENST00000416478 897 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL356320.2-201ENST00000417263 507 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 RPS3AP37-201ENST00000419176 745 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 OFD1P18Y-201ENST00000420889 959 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 Z93242.1-201ENST00000427102 353 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 HIGD1AP12-201ENST00000427832 281 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 MOB1AP1-201ENST00000430903 535 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 GTF2IP7-202ENST00000436677 309 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.44□□□□□ -1.86
LRRTM2O43300 ZNF886P-201ENST00000450781 723 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 RPS24P6-201ENST00000452670 400 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 RPL32P34-201ENST00000486380 400 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC079203.1-201ENST00000487972 404 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL024509.2-201ENST00000493462 493 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC005726.1-201ENST00000494679 427 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC104057.1-201ENST00000515547 497 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 RPL12P22-201ENST00000519073 490 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC007991.1-201ENST00000522680 631 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
LRRTM2O43300 OR4A12P-201ENST00000530847 918 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AP003385.6-201ENST00000531603 374 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.44□□□□□ -1.86
LRRTM2O43300 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC092470.1-201ENST00000546187 132 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC010198.2-201ENST00000550612 259 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.44□□□□□ -1.86
LRRTM2O43300 MTND3P13-201ENST00000574391 343 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 MIR3186-201ENST00000577404 85 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC015688.2-201ENST00000584523 262 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AP001542.2-201ENST00000593141 364 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AL031985.2-201ENST00000600955 480 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC105227.2-201ENST00000615075 605 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC079684.1-201ENST00000621405 437 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 OR1S1-201ENST00000624470 978 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 AC087821.2-201ENST00000637086 450 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 LINC02211-204ENST00000642024 1070 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 AL136164.4-201ENST00000625013 2135 ntBASIC3.44□□□□□ -1.86
LRRTM2O43300 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LRRTM2O43300 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRRTM2O43300 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.44□□□□□ -1.86
LRRTM2O43300 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRTM2O43300 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
LRRTM2O43300 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRTM2O43300 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRRTM2O43300 RNU6-839P-201ENST00000363347 108 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RNU6-444P-201ENST00000383988 108 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RNU6-1226P-201ENST00000384317 107 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 Y_RNA.493-201ENST00000384422 102 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 SNORD116-12-201ENST00000384468 92 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 SNORD116-23-201ENST00000384645 92 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL136310.1-201ENST00000404926 654 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RPS7P15-201ENST00000415804 584 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 Z75741.2-201ENST00000417272 1167 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL513175.2-201ENST00000422071 443 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC002075.2-201ENST00000425207 252 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC010881.1-201ENST00000433830 235 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRTM2O43300 HMGB3P6-201ENST00000444896 598 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AL589880.1-201ENST00000448271 287 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.43□□□□□ -1.86
LRRTM2O43300 AC079776.3-201ENST00000450665 370 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 BX510359.1-201ENST00000456973 237 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC010285.1-201ENST00000470580 392 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC012181.1-201ENST00000479895 423 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 RPL23AP44-201ENST00000482216 473 ntBASIC3.43□□□□□ -1.86
LRRTM2O43300 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms