Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.29□□□□□ -1.88
PHF1O43189 AC021146.8-201ENST00000507455 733 ntBASIC3.29□□□□□ -1.88
PHF1O43189 HMGN1P11-201ENST00000508668 303 ntBASIC3.29□□□□□ -1.88
PHF1O43189 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHF1O43189 AC116353.3-201ENST00000511215 249 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC109471.1-201ENST00000511631 612 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 AC093853.1-201ENST00000515689 483 ntBASIC3.29□□□□□ -1.88
PHF1O43189 RN7SKP234-201ENST00000517173 224 ntBASIC3.29□□□□□ -1.88
PHF1O43189 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHF1O43189 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.29□□□□□ -1.88
PHF1O43189 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.29□□□□□ -1.88
PHF1O43189 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHF1O43189 AP003461.1-201ENST00000528866 78 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.29□□□□□ -1.88
PHF1O43189 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.29□□□□□ -1.88
PHF1O43189 AL132657.2-201ENST00000564417 358 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC109446.2-201ENST00000567872 497 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC099489.2-201ENST00000574976 260 ntBASIC3.29□□□□□ -1.88
PHF1O43189 OR4K7P-201ENST00000580232 945 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.29□□□□□ -1.88
PHF1O43189 AC113194.1-201ENST00000606037 500 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC093783.1-201ENST00000612976 329 ntBASIC3.29□□□□□ -1.88
PHF1O43189 FP236240.3-201ENST00000623061 327 ntBASIC3.29□□□□□ -1.88
PHF1O43189 AC026634.1-201ENST00000634369 198 ntBASIC3.29□□□□□ -1.88
PHF1O43189 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHF1O43189 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
PHF1O43189 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.29□□□□□ -1.88
PHF1O43189 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHF1O43189 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHF1O43189 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHF1O43189 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.28□□□□□ -1.88
PHF1O43189 RNU6-251P-201ENST00000363235 104 ntBASIC3.28□□□□□ -1.88
PHF1O43189 RNU5D-1-201ENST00000363299 116 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHF1O43189 U8.11-201ENST00000384699 133 ntBASIC3.28□□□□□ -1.88
PHF1O43189 U8.12-201ENST00000384701 133 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 FCF1P2-201ENST00000415284 583 ntBASIC3.28□□□□□ -1.88
PHF1O43189 Z97055.1-201ENST00000419730 712 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AL139421.1-201ENST00000423010 169 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AP000907.1-201ENST00000428428 510 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 ATP5F1P1-201ENST00000433775 569 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 HMGB1P37-201ENST00000439613 609 ntBASIC3.28□□□□□ -1.88
PHF1O43189 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.28□□□□□ -1.88
PHF1O43189 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 CEACAMP4-201ENST00000457676 421 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 U8.18-201ENST00000459285 133 ntBASIC3.28□□□□□ -1.88
PHF1O43189 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 RPS20P21-201ENST00000466859 343 ntBASIC3.28□□□□□ -1.88
PHF1O43189 RPS29P2-201ENST00000479278 136 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC092451.1-201ENST00000480211 153 ntBASIC3.28□□□□□ -1.88
PHF1O43189 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC011352.3-201ENST00000505162 593 ntBASIC3.28□□□□□ -1.88
PHF1O43189 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AC090071.1-201ENST00000507713 644 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC105313.1-201ENST00000509121 353 ntBASIC3.28□□□□□ -1.88
PHF1O43189 MTND1P22-201ENST00000510572 951 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AP001207.1-201ENST00000524051 481 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC024224.1-201ENST00000538284 609 ntBASIC3.28□□□□□ -1.88
PHF1O43189 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PHF1O43189 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 GTF2IP22-201ENST00000554443 182 ntBASIC3.28□□□□□ -1.88
PHF1O43189 GTF2IP8-201ENST00000560687 584 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AL133457.1-201ENST00000564251 987 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.28□□□□□ -1.88
PHF1O43189 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.28□□□□□ -1.88
PHF1O43189 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AC009220.3-201ENST00000604318 586 ntBASIC3.28□□□□□ -1.88
PHF1O43189 BRDTP1-201ENST00000605735 677 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.28□□□□□ -1.88
PHF1O43189 AL354760.1-201ENST00000608357 643 ntBASIC3.28□□□□□ -1.88
PHF1O43189 AC012531.5-201ENST00000611375 151 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms