Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC027514.1-201ENST00000588561 1603 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHGDHO43175 AC008033.1-201ENST00000216407 1162 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC067945.1-201ENST00000342609 618 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 Y_RNA.41-201ENST00000362646 102 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 RNU6-1249P-201ENST00000363237 111 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PHGDHO43175 RNU5A-6P-201ENST00000384136 116 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 RNU6-114P-201ENST00000384704 105 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 RPS3AP36-201ENST00000398190 775 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 CCNG1P1-201ENST00000406783 885 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.44□□□□□ -1.7
PHGDHO43175 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.44□□□□□ -1.7
PHGDHO43175 Z74696.2-201ENST00000436514 498 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 HMGB3P9-201ENST00000441799 583 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC012671.1-201ENST00000451912 203 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC008897.1-201ENST00000494006 347 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AL139099.1-201ENST00000497398 403 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AL358832.1-201ENST00000497800 389 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 RPL37P25-201ENST00000507308 276 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC017037.2-201ENST00000513850 890 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC010546.1-201ENST00000569391 485 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 MTND6P33-201ENST00000571794 183 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 CKS1BP3-201ENST00000600888 237 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 Z98200.1-201ENST00000607298 470 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC020634.1-201ENST00000608701 549 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AL138721.1-201ENST00000616756 179 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC006338.2-201ENST00000616864 791 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC002550.2-201ENST00000621246 394 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 MIR6730-201ENST00000622213 67 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 AC007546.2-201ENST00000623996 360 ntBASIC4.44□□□□□ -1.7
PHGDHO43175 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.44□□□□□ -1.7
PHGDHO43175 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PHGDHO43175 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHGDHO43175 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
PHGDHO43175 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PHGDHO43175 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PHGDHO43175 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.44□□□□□ -1.7
PHGDHO43175 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 U3.15-201ENST00000365398 212 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 RNU6-259P-201ENST00000383999 107 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AL133270.1-201ENST00000402635 279 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.43□□□□□ -1.7
PHGDHO43175 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 MTND4LP10-201ENST00000435146 291 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 RABEPKP1-201ENST00000440529 1026 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.43□□□□□ -1.7
PHGDHO43175 RPL23AP43-201ENST00000446445 471 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 GAPDHP17-201ENST00000449858 1001 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.43□□□□□ -1.7
PHGDHO43175 SNORD121B-201ENST00000458838 81 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.43□□□□□ -1.7
PHGDHO43175 SRRM1P2-201ENST00000464531 1192 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 RPS26P28-201ENST00000470806 348 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 RPL12P20-201ENST00000475538 479 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 RPL23AP41-201ENST00000484754 458 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 NPM1P41-201ENST00000512920 831 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AP001922.4-201ENST00000526967 290 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AP003181.2-201ENST00000528941 181 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 BRD9P1-201ENST00000529855 560 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.43□□□□□ -1.7
PHGDHO43175 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.43□□□□□ -1.7
PHGDHO43175 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.43□□□□□ -1.7
PHGDHO43175 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 MIR4436B2-201ENST00000581415 91 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 MIR4436B1-201ENST00000583272 91 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms