Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 MTCO3P12-201ENST00000416718 547 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC006028.1-201ENST00000438379 402 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 AL034418.1-201ENST00000448675 860 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 BX510359.1-201ENST00000456973 237 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RPL6P9-201ENST00000466502 859 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC010301.1-201ENST00000473936 355 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC004062.1-201ENST00000509926 645 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNU5A-7P-201ENST00000515979 116 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNU6-885P-201ENST00000516607 104 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 AP000790.1-201ENST00000528891 737 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC111188.2-201ENST00000529697 1387 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN3O15551 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 AC005183.1-201ENST00000603687 1979 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN3O15551 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN3O15551 CR381572.1-201ENST00000625098 102 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN3O15551 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
CLDN3O15551 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN3O15551 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN3O15551 RNU1-75P-201ENST00000347264 129 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RNU6-582P-201ENST00000362989 107 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RNU5B-1-201ENST00000363286 116 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN3O15551 AL357075.1-201ENST00000404107 726 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN3O15551 RPS7P13-201ENST00000413955 498 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN3O15551 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN3O15551 AC091862.1-201ENST00000438016 1100 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC127537.2-201ENST00000439258 465 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RPL23AP16-201ENST00000441715 421 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN3O15551 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN3O15551 Z75741.1-201ENST00000446793 314 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 MTCO3P2-201ENST00000457365 171 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 MTCO3P35-201ENST00000485582 781 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AL024509.2-201ENST00000493462 493 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 FABP5P12-201ENST00000515543 389 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 RNA5SP135-201ENST00000517019 125 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN3O15551 OR4R2P-201ENST00000530815 597 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN3O15551 RPL21P12-201ENST00000559810 515 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 MIR5680-201ENST00000577577 84 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 ZNF415P1-201ENST00000582279 1166 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 XIAPP1-201ENST00000603162 600 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC128687.1-201ENST00000605304 619 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 AC092184.1-201ENST00000625042 715 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 AL672296.1-201ENST00000427780 2158 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDN3O15551 AC073346.2-201ENST00000624724 2058 ntBASIC3.56□□□□□ -1.84
CLDN3O15551 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN3O15551 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLDN3O15551 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN3O15551 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN3O15551 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN3O15551 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN3O15551 AC007496.3-201ENST00000624987 3443 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 RNU6-50P-201ENST00000362356 103 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 SNORA38.1-201ENST00000364172 131 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 Y_RNA.333-201ENST00000365274 102 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 SNORD82-201ENST00000365530 70 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN3O15551 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN3O15551 SNORD116-23-201ENST00000384645 92 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 RNU6-821P-201ENST00000390995 107 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 AL355615.1-201ENST00000406187 641 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 AC092638.1-201ENST00000411966 1275 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 FCF1P2-201ENST00000415284 583 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 AL049610.1-201ENST00000423374 372 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 AC005345.1-201ENST00000431868 217 ntBASIC3.55□□□□□ -1.84
CLDN3O15551 CST9LP2-201ENST00000437612 320 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms