Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TO15178 FNDC3CP-201ENST00000420795 1155 ntBASIC3.73□□□□□ -1.81
TO15178 AL513174.1-201ENST00000423182 629 ntBASIC3.73□□□□□ -1.81
TO15178 GLRXP1-201ENST00000423261 334 ntBASIC3.73□□□□□ -1.81
TO15178 ZYG11AP1-201ENST00000430329 837 ntBASIC3.73□□□□□ -1.81
TO15178 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.73□□□□□ -1.81
TO15178 HMGB1P12-201ENST00000438594 598 ntBASIC3.73□□□□□ -1.81
TO15178 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.73□□□□□ -1.81
TO15178 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.73□□□□□ -1.81
TO15178 HSPE1P28-201ENST00000443139 211 ntBASIC3.73□□□□□ -1.81
TO15178 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.73□□□□□ -1.81
TO15178 SYPL1P1-201ENST00000473622 768 ntBASIC3.73□□□□□ -1.81
TO15178 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.73□□□□□ -1.81
TO15178 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
TO15178 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.73□□□□□ -1.81
TO15178 AC022861.1-201ENST00000522981 663 ntBASIC3.73□□□□□ -1.81
TO15178 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TO15178 OSBPL9P5-201ENST00000542581 171 ntBASIC3.73□□□□□ -1.81
TO15178 AC091516.1-201ENST00000549191 703 ntBASIC3.73□□□□□ -1.81
TO15178 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.73□□□□□ -1.81
TO15178 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.73□□□□□ -1.81
TO15178 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.73□□□□□ -1.81
TO15178 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 AC020914.6-201ENST00000594327 272 ntBASIC3.73□□□□□ -1.81
TO15178 VN1R90P-201ENST00000595717 726 ntBASIC3.73□□□□□ -1.81
TO15178 AP000811.1-201ENST00000603803 651 ntBASIC3.73□□□□□ -1.81
TO15178 AL451044.1-201ENST00000604867 238 ntBASIC3.73□□□□□ -1.81
TO15178 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 AL603755.1-201ENST00000619504 163 ntBASIC3.73□□□□□ -1.81
TO15178 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 U6.98-201ENST00000637157 84 ntBASIC3.73□□□□□ -1.81
TO15178 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.73□□□□□ -1.81
TO15178 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TO15178 ZNF962P-201ENST00000443465 3140 ntBASIC3.73□□□□□ -1.81
TO15178 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TO15178 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.73□□□□□ -1.81
TO15178 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.72□□□□□ -1.81
TO15178 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TO15178 RPL23AP57-201ENST00000332361 466 ntBASIC3.72□□□□□ -1.81
TO15178 Y_RNA.18-201ENST00000362461 102 ntBASIC3.72□□□□□ -1.81
TO15178 Y_RNA.169-201ENST00000363745 96 ntBASIC3.72□□□□□ -1.81
TO15178 RNU1-13P-201ENST00000384499 162 ntBASIC3.72□□□□□ -1.81
TO15178 CYCSP45-201ENST00000402289 315 ntBASIC3.72□□□□□ -1.81
TO15178 MIR1251-201ENST00000408552 70 ntBASIC3.72□□□□□ -1.81
TO15178 RNU4-72P-201ENST00000410754 173 ntBASIC3.72□□□□□ -1.81
TO15178 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
TO15178 AC083875.1-201ENST00000419509 405 ntBASIC3.72□□□□□ -1.81
TO15178 MTND2P18-201ENST00000419962 1030 ntBASIC3.72□□□□□ -1.81
TO15178 AL159169.1-201ENST00000421119 127 ntBASIC3.72□□□□□ -1.81
TO15178 AL365203.2-201ENST00000423444 196 ntBASIC3.72□□□□□ -1.81
TO15178 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.72□□□□□ -1.81
TO15178 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.72□□□□□ -1.81
TO15178 AL365396.1-201ENST00000430854 671 ntBASIC3.72□□□□□ -1.81
TO15178 SETD6P1-201ENST00000444575 317 ntBASIC3.72□□□□□ -1.81
TO15178 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
TO15178 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.72□□□□□ -1.81
TO15178 SUMO2P2-201ENST00000456482 255 ntBASIC3.72□□□□□ -1.81
TO15178 RNU7-136P-201ENST00000458819 69 ntBASIC3.72□□□□□ -1.81
TO15178 VN1R17P-201ENST00000472048 1090 ntBASIC3.72□□□□□ -1.81
TO15178 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
TO15178 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.72□□□□□ -1.81
TO15178 AC010625.1-201ENST00000511296 403 ntBASIC3.72□□□□□ -1.81
TO15178 IGKV2-23-201ENST00000518729 323 ntBASIC3.72□□□□□ -1.81
TO15178 AC007834.2-201ENST00000536310 343 ntBASIC3.72□□□□□ -1.81
TO15178 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.72□□□□□ -1.81
TO15178 AC090616.2-202ENST00000584248 222 ntBASIC3.72□□□□□ -1.81
TO15178 AC011468.4-201ENST00000603942 409 ntBASIC3.72□□□□□ -1.81
TO15178 MIR6868-201ENST00000611215 58 ntBASIC3.72□□□□□ -1.81
TO15178 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.72□□□□□ -1.81
TO15178 AC004009.2-201ENST00000623016 728 ntBASIC3.72□□□□□ -1.81
TO15178 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TO15178 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
TO15178 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
TO15178 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TO15178 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.72□□□□□ -1.81
TO15178 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
TO15178 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TO15178 AC097714.1-201ENST00000511272 1647 ntBASIC3.71□□□□□ -1.82
TO15178 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.71□□□□□ -1.82
TO15178 RNU6-462P-201ENST00000362659 105 ntBASIC3.71□□□□□ -1.82
TO15178 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms