Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 Y_RNA.653-201ENST00000459091 95 ntBASIC5.61□□□□□ -1.51
SOX1O00570 RNU7-180P-201ENST00000459240 63 ntBASIC5.61□□□□□ -1.51
SOX1O00570 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 AL049874.2-201ENST00000492636 288 ntBASIC5.61□□□□□ -1.51
SOX1O00570 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 AC116562.3-201ENST00000506136 177 ntBASIC5.61□□□□□ -1.51
SOX1O00570 MTND4LP22-201ENST00000508209 276 ntBASIC5.61□□□□□ -1.51
SOX1O00570 FTH1P21-201ENST00000512179 511 ntBASIC5.61□□□□□ -1.51
SOX1O00570 RNU6-566P-201ENST00000516790 107 ntBASIC5.61□□□□□ -1.51
SOX1O00570 RNA5SP143-201ENST00000516936 115 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AC009902.1-201ENST00000519351 183 ntBASIC5.61□□□□□ -1.51
SOX1O00570 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX1O00570 AC068587.5-201ENST00000528506 175 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 AC010424.2-201ENST00000607594 443 ntBASIC5.61□□□□□ -1.51
SOX1O00570 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX1O00570 AC103710.2-201ENST00000609912 942 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 AC006133.1-201ENST00000617106 264 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AC130650.2-201ENST00000618736 2403 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AC002525.1-201ENST00000624392 1622 ntBASIC5.61□□□□□ -1.51
SOX1O00570 AL137141.1-201ENST00000624622 4836 ntBASIC5.61□□□□□ -1.51
SOX1O00570 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 SAMMSON-226ENST00000642089 1582 ntBASIC5.61□□□□□ -1.51
SOX1O00570 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 AC022893.2-201ENST00000564832 3296 ntBASIC5.61□□□□□ -1.51
SOX1O00570 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 AC144833.1-201ENST00000567953 4089 ntBASIC5.6□□□□□ -1.51
SOX1O00570 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SOX1O00570 TAB3P1-202ENST00000452645 1634 ntBASIC5.6□□□□□ -1.51
SOX1O00570 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 MTND4P1-201ENST00000457501 1466 ntBASIC5.6□□□□□ -1.51
SOX1O00570 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 RNU5A-8P-201ENST00000364102 114 ntBASIC5.6□□□□□ -1.51
SOX1O00570 MT-TG-201ENST00000387429 68 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AL121834.1-202ENST00000404494 277 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RNU6-985P-201ENST00000410182 104 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RPL12P34-201ENST00000424532 479 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RPL7L1P10-201ENST00000427790 463 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX1O00570 KRT8P51-201ENST00000438938 274 ntBASIC5.6□□□□□ -1.51
SOX1O00570 TXNP1-201ENST00000441872 371 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AC079922.1-201ENST00000443291 359 ntBASIC5.6□□□□□ -1.51
SOX1O00570 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 FTH1P25-201ENST00000447665 469 ntBASIC5.6□□□□□ -1.51
SOX1O00570 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX1O00570 AC108059.3-201ENST00000456388 214 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RNU6-1218P-201ENST00000458990 108 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RNU6-1208P-201ENST00000459588 107 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AC058823.1-201ENST00000485315 474 ntBASIC5.6□□□□□ -1.51
SOX1O00570 NIP7P2-201ENST00000485801 544 ntBASIC5.6□□□□□ -1.51
SOX1O00570 RN7SL244P-201ENST00000493405 297 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AP002812.1-201ENST00000495378 474 ntBASIC5.6□□□□□ -1.51
SOX1O00570 MTCYBP40-201ENST00000509390 1135 ntBASIC5.6□□□□□ -1.51
SOX1O00570 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX1O00570 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.6□□□□□ -1.51
SOX1O00570 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX1O00570 RN7SKP24-201ENST00000515888 284 ntBASIC5.6□□□□□ -1.51
SOX1O00570 MYL12AP1-201ENST00000518490 515 ntBASIC5.6□□□□□ -1.51
SOX1O00570 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX1O00570 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.6□□□□□ -1.51
SOX1O00570 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX1O00570 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX1O00570 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX1O00570 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX1O00570 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX1O00570 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SOX1O00570 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SOX1O00570 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.59□□□□□ -1.51
SOX1O00570 AC108751.5-201ENST00000492880 1336 ntBASIC5.59□□□□□ -1.51
SOX1O00570 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 RN7SKP224-201ENST00000364140 325 ntBASIC5.59□□□□□ -1.51
SOX1O00570 Y_RNA.333-201ENST00000365274 102 ntBASIC5.59□□□□□ -1.51
SOX1O00570 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SOX1O00570 RN7SKP106-201ENST00000410832 272 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms