Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.29□□□□□ -2.04
SDCBPO00560 AC117522.3-201ENST00000507974 584 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.29□□□□□ -2.04
SDCBPO00560 RNU6-1073P-201ENST00000517182 106 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 SNORA70.24-201ENST00000517233 118 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.29□□□□□ -2.04
SDCBPO00560 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.29□□□□□ -2.04
SDCBPO00560 AC004486.1-201ENST00000546846 233 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.29□□□□□ -2.04
SDCBPO00560 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.29□□□□□ -2.04
SDCBPO00560 AC008277.2-201ENST00000605196 797 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AC131902.3-201ENST00000611767 581 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AL359535.1-201ENST00000612100 1087 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SDCBPO00560 AC090617.7-201ENST00000623952 126 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SDCBPO00560 AC103988.1-201ENST00000566382 2177 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 AC011978.2-201ENST00000569835 2054 ntBASIC2.29□□□□□ -2.04
SDCBPO00560 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SDCBPO00560 MTCO1P8-201ENST00000416914 1523 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 AC109315.1-201ENST00000584143 1347 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 SNORD21-201ENST00000383953 95 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 MTCO3P4-201ENST00000419236 787 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.28□□□□□ -2.04
SDCBPO00560 RPL23AP20-201ENST00000447965 421 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.28□□□□□ -2.04
SDCBPO00560 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.28□□□□□ -2.04
SDCBPO00560 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SDCBPO00560 AP001025.2-201ENST00000490908 477 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 AC098799.2-201ENST00000509466 868 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 AC008494.2-201ENST00000514544 370 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 RNU6-56P-201ENST00000516986 93 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.28□□□□□ -2.04
SDCBPO00560 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.28□□□□□ -2.04
SDCBPO00560 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.28□□□□□ -2.04
SDCBPO00560 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 AL356575.1-201ENST00000603008 283 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 BX664608.1-201ENST00000610519 487 ntBASIC2.28□□□□□ -2.04
SDCBPO00560 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.28□□□□□ -2.04
SDCBPO00560 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SDCBPO00560 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SDCBPO00560 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.05
SDCBPO00560 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDCBPO00560 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SDCBPO00560 AC004925.1-201ENST00000624256 2706 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.27□□□□□ -2.05
SDCBPO00560 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDCBPO00560 AC022031.1-201ENST00000585985 2593 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SDCBPO00560 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SDCBPO00560 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SDCBPO00560 SNORA48.5-201ENST00000391143 135 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.27□□□□□ -2.05
SDCBPO00560 HSPE1P1-201ENST00000421494 318 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AL139132.1-201ENST00000431587 344 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 RPS3AP12-201ENST00000443616 753 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 Z77249.1-201ENST00000444622 1175 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.27□□□□□ -2.05
SDCBPO00560 AP002345.1-201ENST00000456493 928 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 RPL5P24-201ENST00000463742 885 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.27□□□□□ -2.05
SDCBPO00560 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 SUMO1P1-201ENST00000497904 306 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 HMGB1P3-201ENST00000502802 616 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.27□□□□□ -2.05
SDCBPO00560 AC026427.2-201ENST00000506228 536 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 ARL4AP2-201ENST00000507378 601 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC026412.2-201ENST00000512270 1075 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC016065.2-201ENST00000514530 444 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.27□□□□□ -2.05
SDCBPO00560 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.27□□□□□ -2.05
SDCBPO00560 AP003717.3-201ENST00000544832 1180 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.27□□□□□ -2.05
SDCBPO00560 AC074029.2-201ENST00000551045 634 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AC009268.1-201ENST00000561352 1203 ntBASIC2.27□□□□□ -2.05
SDCBPO00560 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.27□□□□□ -2.05
SDCBPO00560 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms