Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 TRAV31-201ENST00000502780 342 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 IGKV2-23-201ENST00000518729 323 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC28A1O00337 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC28A1O00337 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
SLC28A1O00337 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC28A1O00337 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC007224.1-201ENST00000564410 144 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 AL132657.2-201ENST00000564417 358 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 SNORD84-203ENST00000584275 78 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC245036.5-201ENST00000596330 847 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 AC103710.3-201ENST00000608157 948 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 AL157392.4-201ENST00000609756 345 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC28A1O00337 AC110801.1-201ENST00000623590 212 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.43□□□□□ -1.86
SLC28A1O00337 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC28A1O00337 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
SLC28A1O00337 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
SLC28A1O00337 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SLC28A1O00337 OTUD4P1-201ENST00000237841 3067 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 AC093908.1-201ENST00000623125 8092 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 RNU6-1122P-201ENST00000384449 107 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 PSMA6P3-201ENST00000428242 164 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 MTND2P20-201ENST00000440805 661 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AL662791.1-201ENST00000441992 928 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 MTCO2P25-201ENST00000447065 681 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 RPS3AP46-201ENST00000448352 682 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 SETP14-201ENST00000497538 873 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 UBE2V1P12-201ENST00000503954 474 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 HMGB3P15-201ENST00000507326 574 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 HMGB1P28-201ENST00000507778 552 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC28A1O00337 SNORA70.19-201ENST00000516717 90 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AC104986.1-201ENST00000517978 436 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AC136624.4-201ENST00000573044 370 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 MIR5685-201ENST00000579080 79 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 MIR4637-201ENST00000582405 84 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 AL365503.1-201ENST00000605247 905 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 RMST_8.1-201ENST00000610287 165 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC28A1O00337 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SLC28A1O00337 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.42□□□□□ -1.86
SLC28A1O00337 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SLC28A1O00337 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SLC28A1O00337 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A1O00337 RN7SKP227-201ENST00000364445 330 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 Y_RNA.408-201ENST00000383987 102 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AL590704.1-201ENST00000402856 794 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 RNA5SP80-201ENST00000410475 111 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 RNU4-22P-201ENST00000411058 166 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC099677.1-201ENST00000420575 175 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A1O00337 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 ARF4P2-201ENST00000430209 526 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 MTND4LP10-201ENST00000435146 291 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC28A1O00337 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A1O00337 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 RPL12P26-201ENST00000452430 487 ntBASIC3.41□□□□□ -1.86
SLC28A1O00337 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A1O00337 HMGN2P16-201ENST00000456802 261 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms