Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AK6P1-201ENST00000540219 478 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.91□□□□□ -1.62
CBX4O00257 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 AC025678.1-201ENST00000567861 338 ntBASIC4.91□□□□□ -1.62
CBX4O00257 MIR3936-201ENST00000584304 110 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC068790.5-201ENST00000602741 355 ntBASIC4.91□□□□□ -1.62
CBX4O00257 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 AC011451.2-201ENST00000604303 598 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL391813.2-201ENST00000609113 322 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC017083.3-201ENST00000609955 700 ntBASIC4.91□□□□□ -1.62
CBX4O00257 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 AC002553.4-201ENST00000616896 331 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AL159972.1-201ENST00000625150 448 ntBASIC4.91□□□□□ -1.62
CBX4O00257 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 MAPK10-304ENST00000641341 3984 ntBASIC4.91□□□□□ -1.62
CBX4O00257 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CBX4O00257 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CBX4O00257 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.91□□□□□ -1.62
CBX4O00257 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.9□□□□□ -1.62
CBX4O00257 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CBX4O00257 Y_RNA.493-201ENST00000384422 102 ntBASIC4.9□□□□□ -1.63
CBX4O00257 RNU6-456P-201ENST00000384493 107 ntBASIC4.9□□□□□ -1.63
CBX4O00257 RNU6-114P-201ENST00000384704 105 ntBASIC4.9□□□□□ -1.63
CBX4O00257 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CBX4O00257 RN7SKP100-201ENST00000411258 284 ntBASIC4.9□□□□□ -1.63
CBX4O00257 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX4O00257 MTCO1P20-201ENST00000425366 358 ntBASIC4.9□□□□□ -1.63
CBX4O00257 RPS27AP12-201ENST00000429552 465 ntBASIC4.9□□□□□ -1.63
CBX4O00257 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.9□□□□□ -1.63
CBX4O00257 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.9□□□□□ -1.63
CBX4O00257 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX4O00257 snoU109.4-201ENST00000458953 143 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC006967.1-201ENST00000467608 589 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC026979.1-201ENST00000492525 396 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX4O00257 Y_RNA.693-201ENST00000516641 110 ntBASIC4.9□□□□□ -1.63
CBX4O00257 Y_RNA.704-201ENST00000516851 102 ntBASIC4.9□□□□□ -1.63
CBX4O00257 RN7SKP116-201ENST00000516902 319 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.9□□□□□ -1.63
CBX4O00257 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 OR4P1P-201ENST00000530808 1136 ntBASIC4.9□□□□□ -1.63
CBX4O00257 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX4O00257 ATP5J2P6-201ENST00000565203 266 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.9□□□□□ -1.63
CBX4O00257 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 MIR3167-201ENST00000579623 85 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 KC877982.1-201ENST00000602313 470 ntBASIC4.9□□□□□ -1.63
CBX4O00257 RPL26P30-202ENST00000602923 645 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AL391646.1-201ENST00000603860 190 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC004067.1-201ENST00000608733 700 ntBASIC4.9□□□□□ -1.63
CBX4O00257 OR6R2P-201ENST00000609216 300 ntBASIC4.9□□□□□ -1.63
CBX4O00257 AC112204.3-201ENST00000623822 332 ntBASIC4.9□□□□□ -1.63
CBX4O00257 MIR1321-201ENST00000637766 79 ntBASIC4.9□□□□□ -1.63
CBX4O00257 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.9□□□□□ -1.63
CBX4O00257 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CBX4O00257 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX4O00257 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CBX4O00257 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CBX4O00257 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CBX4O00257 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CBX4O00257 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CBX4O00257 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 AC010928.1-201ENST00000592477 1447 ntBASIC4.89□□□□□ -1.63
CBX4O00257 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CBX4O00257 AC107068.1-201ENST00000563286 4218 ntBASIC4.89□□□□□ -1.63
CBX4O00257 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CBX4O00257 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CBX4O00257 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.89□□□□□ -1.63
CBX4O00257 RNU4-1-201ENST00000363925 141 ntBASIC4.89□□□□□ -1.63
CBX4O00257 RNU6-1090P-201ENST00000364065 94 ntBASIC4.89□□□□□ -1.63
CBX4O00257 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CBX4O00257 RNU6-821P-201ENST00000390995 107 ntBASIC4.89□□□□□ -1.63
CBX4O00257 HMGN1P24-201ENST00000412282 298 ntBASIC4.89□□□□□ -1.63
CBX4O00257 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 ELOCP18-201ENST00000434209 337 ntBASIC4.89□□□□□ -1.63
CBX4O00257 HMGB1P31-201ENST00000437242 427 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AC009963.2-201ENST00000453431 138 ntBASIC4.89□□□□□ -1.63
CBX4O00257 RPL12P20-201ENST00000475538 479 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC091868.1-201ENST00000508746 304 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC074344.1-201ENST00000512823 224 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.89□□□□□ -1.63
CBX4O00257 OR8L1P-201ENST00000534005 955 ntBASIC4.89□□□□□ -1.63
CBX4O00257 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.89□□□□□ -1.63
CBX4O00257 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.89□□□□□ -1.63
CBX4O00257 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms