Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC068135.1-201ENST00000446164 246 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 GXYLT1P1-201ENST00000446657 490 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL096803.2-201ENST00000450032 677 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTATP6P14-201ENST00000455189 673 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC005476.1-201ENST00000554427 397 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AF129408.1-201ENST00000608767 431 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC096586.1-201ENST00000610267 561 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC139769.3-201ENST00000618383 175 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC009269.6-201ENST00000621778 588 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 PLCE1P1-201ENST00000622094 305 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC015726.3-201ENST00000624501 418 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL645568.2-201ENST00000432815 1337 ntBASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA80A-201ENST00000363922 136 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 U3.11-201ENST00000364476 212 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNU6-932P-201ENST00000391108 106 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL5P18-201ENST00000406671 891 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 DEFB130D-201ENST00000426866 237 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPS24P8-201ENST00000431490 402 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPS26P30-201ENST00000443431 335 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL21P103-201ENST00000479921 488 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC010374.2-201ENST00000512933 535 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP003717.3-201ENST00000544832 1180 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC027104.1-201ENST00000563702 681 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTND4LP24-201ENST00000572277 291 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR4298-201ENST00000584380 73 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 IGHV3-29-201ENST00000604817 344 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC018645.2-201ENST00000609151 472 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC107294.3-201ENST00000609211 526 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 STMN1P1-201ENST00000617809 440 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC099506.2-201ENST00000623074 221 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 ZNF849P-201ENST00000594711 1566 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 FAM35BP-202ENST00000497389 3337 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC116096.1-201ENST00000566804 2314 ntBASIC3.07□□□□□ -1.92
TMX2-CTNND1H3BSU7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AF117829.1-206ENST00000621883 3802 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 SNORA44-201ENST00000384584 132 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC093422.3-201ENST00000428506 305 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 ELOCP6-201ENST00000429066 328 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 FABP5P3-201ENST00000437960 408 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC107083.1-201ENST00000439643 279 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC092685.1-201ENST00000447960 1243 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 ELOCP12-201ENST00000458706 328 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 UBE2DNL-203ENST00000474922 222 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms