Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.1□□□□□ -1.91
RGPD3A6NKT7 AL389895.1-201ENST00000554127 252 ntBASIC3.1□□□□□ -1.91
RGPD3A6NKT7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.1□□□□□ -1.91
RGPD3A6NKT7 FRG1DP-201ENST00000635586 771 ntBASIC3.1□□□□□ -1.91
RGPD3A6NKT7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RGPD3A6NKT7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 AL512646.1-201ENST00000269395 1077 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 XIAPP3-201ENST00000312918 795 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 HMGB1P25-201ENST00000468402 607 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 AC011037.1-201ENST00000483964 558 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 RNA5SP281-201ENST00000516504 135 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 AL020991.1-201ENST00000612314 373 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 MIR1291-201ENST00000627649 87 ntBASIC3.09□□□□□ -1.91
RGPD3A6NKT7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
RGPD3A6NKT7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.09□□□□□ -1.92
RGPD3A6NKT7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.09□□□□□ -1.92
RGPD3A6NKT7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
RGPD3A6NKT7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 NCSTNP1-201ENST00000406229 144 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 Z98742.2-201ENST00000431564 187 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 KCTD9P5-201ENST00000504141 1170 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 AC116337.1-201ENST00000509680 687 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 AC108729.3-201ENST00000513484 108 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 AC021269.2-201ENST00000532318 330 ntBASIC3.08□□□□□ -1.92
RGPD3A6NKT7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.08□□□□□ -1.92
RGPD3A6NKT7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 SNORA62.2-201ENST00000364672 152 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 SNORA80E-201ENST00000384744 137 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 MIR181A2-201ENST00000384863 110 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 RNU6-321P-201ENST00000410912 106 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 RPL23AP36-201ENST00000413895 458 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC048351.1-201ENST00000420064 602 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC135628.1-201ENST00000568867 534 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 MIR5092-201ENST00000583139 88 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AP004247.3-201ENST00000608682 624 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC245100.2-201ENST00000454544 1679 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 Y_RNA.508-201ENST00000384502 114 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 EIF5P1-201ENST00000400019 1231 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC106901.1-201ENST00000425086 698 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AL590399.6-201ENST00000446396 307 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC108860.1-201ENST00000484521 383 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC068305.1-201ENST00000497406 726 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 RNA5SP445-201ENST00000515889 115 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 CBX3P5-201ENST00000552017 521 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC083760.1-201ENST00000589621 670 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AC012119.1-201ENST00000603184 222 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 AP001521.1-201ENST00000609150 300 ntBASIC3.07□□□□□ -1.92
RGPD3A6NKT7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.07□□□□□ -1.92
RGPD3A6NKT7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AC011460.1-201ENST00000636268 1834 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AC005539.1-201ENST00000443768 1479 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 RNA5SP239-201ENST00000410218 129 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AIMP1P1-201ENST00000418670 937 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 ACTR6P1-201ENST00000514311 1104 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 SNRPGP18-201ENST00000553000 214 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AC023813.4-201ENST00000607580 580 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 Z99129.2-201ENST00000619967 314 ntBASIC3.06□□□□□ -1.92
RGPD3A6NKT7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RGPD3A6NKT7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RGPD3A6NKT7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms