Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC128657.1-201ENST00000549459 145 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 OR11H5P-201ENST00000554039 926 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL161734.1-201ENST00000609720 557 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC098657.3-201ENST00000620434 263 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AL356863.1-201ENST00000623378 1080 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC103798.2-201ENST00000624292 632 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AP000553.5-201ENST00000641933 54 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC010733.2-201ENST00000589496 5702 ntBASIC1.65□□□□□ -2.15
LINC01549A6NIU2 AC135776.4-201ENST00000624300 1904 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AL596028.1-201ENST00000326971 197 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RNU6-600P-201ENST00000362524 99 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RNU1-85P-201ENST00000364127 164 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 SNORA51.2-201ENST00000364595 132 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 MIR1193-201ENST00000408109 78 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RNU6-1077P-201ENST00000410506 102 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC007064.1-201ENST00000412238 351 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 HMGN2P38-201ENST00000423806 265 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC093084.1-201ENST00000424233 687 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RPL35AP12-201ENST00000425362 338 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 SDR42E1P3-201ENST00000438345 502 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC009220.1-201ENST00000451614 275 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC090515.1-201ENST00000465295 476 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RBM43P1-201ENST00000476891 1081 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 GZMAP1-201ENST00000503054 631 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC010374.2-201ENST00000512933 535 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 RN7SKP24-201ENST00000515888 284 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC087373.1-201ENST00000524920 491 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 OR5AK3P-201ENST00000527486 1297 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 MIR5007-201ENST00000583098 95 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC061975.8-201ENST00000587058 721 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC004241.3-201ENST00000611728 517 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 MIR6132-201ENST00000622083 109 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 MIR6766-201ENST00000622641 72 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC079597.1-201ENST00000624306 508 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC087565.3-202ENST00000642085 1603 ntBASIC1.64□□□□□ -2.15
LINC01549A6NIU2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.64□□□□□ -2.15
LINC01549A6NIU2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 ZNF734P-201ENST00000419494 1534 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL360182.1-201ENST00000397433 468 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 RN7SKP27-201ENST00000410684 333 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 PTP4A1P3-201ENST00000433661 420 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL451074.3-201ENST00000437709 472 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC006994.1-201ENST00000438212 839 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 PGBD4P3-201ENST00000440731 581 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 MTCYBP21-201ENST00000443300 1113 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 RPL23AP15-201ENST00000450202 459 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 MRPL42P6-201ENST00000486397 371 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 RNA5SP364-201ENST00000516938 78 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC023632.4-201ENST00000517783 191 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC025755.1-201ENST00000521306 278 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC006023.1-201ENST00000603944 259 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 YPEL5P2-201ENST00000605553 359 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL159169.3-201ENST00000608871 561 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 MIR378J-201ENST00000611988 109 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC123768.4-201ENST00000616244 701 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AP003122.6-201ENST00000623831 495 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC016717.3-201ENST00000624730 554 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms