Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AL163153.1-201ENST00000554223 283 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AL133153.1-201ENST00000557756 303 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AL031320.1-201ENST00000604177 357 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AC124303.1-201ENST00000605703 360 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AP001521.2-201ENST00000608772 546 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AC244107.2-201ENST00000611773 76 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AP001486.3-201ENST00000615334 372 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 uc_338.7-201ENST00000621834 124 ntBASIC6.31□□□□□ -1.4
USP17L3A6NCW0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
USP17L3A6NCW0 AL138820.1-201ENST00000617901 5305 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC092070.2-203ENST00000598377 3644 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC090229.1-201ENST00000590983 1609 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 Y_RNA.459-201ENST00000384251 102 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 PPIAP9-201ENST00000403866 498 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 RN7SKP114-201ENST00000410327 279 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 RPS3AP52-201ENST00000435639 297 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 PRPF38AP2-201ENST00000438179 851 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC073465.2-201ENST00000440938 498 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 RPL34P20-201ENST00000442771 351 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC083899.1-201ENST00000454465 3819 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL049874.2-201ENST00000492636 288 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC140172.1-201ENST00000502928 141 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AP000889.2-201ENST00000532684 490 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 CTHRC1P1-201ENST00000605383 469 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC113194.1-201ENST00000606037 500 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL390240.1-201ENST00000612950 384 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC010205.1-201ENST00000616668 449 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AL359757.2-201ENST00000624309 274 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 AC000095.2-202ENST00000637415 154 ntBASIC6.3□□□□□ -1.4
USP17L3A6NCW0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP17L3A6NCW0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 RNU6-1078P-201ENST00000364522 103 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 RNA5SP428-201ENST00000365129 132 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 Y_RNA.395-201ENST00000383945 109 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 MIR548K-201ENST00000408406 116 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC074085.1-201ENST00000413598 418 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC092017.2-201ENST00000427600 362 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 NDUFB4P8-201ENST00000435351 367 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 HMGB3P11-201ENST00000440127 604 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC011753.3-201ENST00000443436 406 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 RPL36AP13-201ENST00000457490 317 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AL162395.1-201ENST00000457882 422 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 RN7SL244P-201ENST00000493405 297 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC008897.1-201ENST00000494006 347 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 OR7H2P-201ENST00000513483 306 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.29□□□□□ -1.4
USP17L3A6NCW0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.29□□□□□ -1.4
USP17L3A6NCW0 FAM60DP-201ENST00000524174 632 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms