Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
TCRBV3S1A0A5B6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 RNU1-140P-201ENST00000365040 165 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 MIR27B-201ENST00000385129 97 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 Y_RNA.625-201ENST00000411256 107 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 BX682237.1-201ENST00000415016 335 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 NIPA2P1-201ENST00000426223 976 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AL671855.1-201ENST00000446875 1203 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AC025423.2-201ENST00000537570 439 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 CKS1BP1-201ENST00000555221 240 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AL121594.4-201ENST00000556211 1196 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 AL160394.1-201ENST00000624765 724 ntBASIC2.23□□□□□ -2.05
TCRBV3S1A0A5B6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC013404.1-201ENST00000413068 249 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC021205.1-201ENST00000468797 348 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 RPL23AP45-201ENST00000476406 468 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 RPS4XP6-201ENST00000477670 797 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 RPL30P11-201ENST00000495304 339 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC093755.1-201ENST00000512950 1023 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 RPL23AP84-201ENST00000571193 464 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC079880.2-201ENST00000603790 1213 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AL161912.3-201ENST00000605404 628 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 HMGN2P28-201ENST00000606102 262 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AL136295.6-201ENST00000610486 658 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC068831.7-201ENST00000616954 363 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 AC090897.3-201ENST00000636973 1157 ntBASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TCRBV3S1A0A5B6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 NACA3P-201ENST00000359690 648 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 CD24P4-201ENST00000382840 243 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 FO393413.1-201ENST00000402892 195 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 RPS3AP25-201ENST00000411660 793 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 RPS6P14-201ENST00000425165 719 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC091390.3-201ENST00000426478 338 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 PRSS3P4-201ENST00000453323 162 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 TRBV26-201ENST00000456572 344 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 GTF2IP9-201ENST00000502460 301 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 SNORA67.7-201ENST00000516664 135 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AL049874.4-201ENST00000557593 255 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC025281.1-201ENST00000567026 265 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AP001029.3-201ENST00000588063 596 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 HSPE1P14-201ENST00000605812 302 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC006133.1-201ENST00000617106 264 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 AC006249.1-201ENST00000621223 471 ntBASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
TCRBV3S1A0A5B6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RPS3AP26-201ENST00000398259 784 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 MIR1289-1-201ENST00000408836 144 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RPL6P5-201ENST00000445678 828 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RSL24D1P3-201ENST00000449255 495 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 LINC00888-204ENST00000487386 421 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 AC005351.1-201ENST00000511152 786 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RPL7L1P13-201ENST00000511702 739 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 MTCO2P32-201ENST00000514865 403 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RN7SKP24-201ENST00000515888 284 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RNA5SP320-201ENST00000516263 124 ntBASIC2.2□□□□□ -2.06
TCRBV3S1A0A5B6 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms