Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.34□□□□□ -2.2
LINC01558Q9Y6Z2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
LINC01558Q9Y6Z2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
LINC01558Q9Y6Z2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
LINC01558Q9Y6Z2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
LINC01558Q9Y6Z2 AC244517.1-201ENST00000606030 2086 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 RLIMP1-201ENST00000339626 1680 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC008669.1-201ENST00000565823 2178 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP124-201ENST00000362739 110 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SNORD17-201ENST00000390930 237 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP178-201ENST00000410380 128 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 HMGN1P24-201ENST00000412282 298 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 OR8G2P-201ENST00000412796 908 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AL356379.1-201ENST00000414105 126 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SYF2P2-201ENST00000417620 583 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MTCO3P30-201ENST00000426425 670 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 ATP5F1P1-201ENST00000433775 569 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 GPM6BP3-201ENST00000442797 145 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 TPTE2P6-202ENST00000445572 1007 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 HMGB1P48-201ENST00000446155 598 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 COX6CP12-201ENST00000446748 202 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 CEACAMP11-201ENST00000455211 583 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC010099.1-201ENST00000455434 375 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 RPL23AP31-201ENST00000456160 467 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC023141.9-201ENST00000458734 412 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 RPL23AP49-201ENST00000492925 468 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC111000.5-201ENST00000506559 1178 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 OR7H2P-201ENST00000513483 306 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC109329.2-201ENST00000519658 482 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AP001804.3-201ENST00000525146 880 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 OR5AQ1P-201ENST00000527596 927 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC068831.4-201ENST00000556118 109 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC087481.2-201ENST00000565492 330 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AGGF1P5-201ENST00000567900 919 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SNORD95-201ENST00000579879 68 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MIR3117-201ENST00000584034 78 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MIR4276-201ENST00000584832 70 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC107982.3-201ENST00000584957 985 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC100793.4-201ENST00000613683 429 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AL355810.1-201ENST00000614629 552 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MIR6834-201ENST00000622807 81 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 AC004808.2-201ENST00000627965 773 ntBASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01558Q9Y6Z2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA3A-201ENST00000364113 130 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 OR52E6-202ENST00000379946 954 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA9-201ENST00000384215 133 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 MIR431-201ENST00000385266 114 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA46.1-201ENST00000391069 153 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 SFR1P1-201ENST00000403720 688 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 HSFY1P1-201ENST00000423928 1178 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AL590762.3-201ENST00000436372 640 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 UBE2V1P13-201ENST00000436983 439 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 CEACAMP7-201ENST00000444105 496 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 CACYBPP2-201ENST00000453625 678 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 EIF4EP3-201ENST00000498782 656 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 HPRT1P1-201ENST00000509498 657 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 AC133963.2-201ENST00000513686 578 ntBASIC1.32□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP364-201ENST00000516938 78 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms