Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AL592437.1-201ENST00000443781 492 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC092451.1-201ENST00000480211 153 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 OR6C73P-201ENST00000546432 358 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 ATP5F1P7-201ENST00000567330 760 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC103810.6-201ENST00000606708 136 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC121761.2-201ENST00000617300 689 ntBASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN10AQ9Y5Y9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
SCN10AQ9Y5Y9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 U8.2-201ENST00000363156 134 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 snoU13.15-201ENST00000459407 104 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 TXNP6-201ENST00000510190 310 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 RNU6-1231P-201ENST00000517185 103 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LLPHP1-201ENST00000603571 367 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 MTND5P19-201ENST00000424872 1794 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AC016717.2-201ENST00000609089 5141 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 ZNF542P-204ENST00000482727 1305 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 SNORA70E-201ENST00000384492 135 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 RNU2-37P-201ENST00000410695 177 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 RPL7P10-201ENST00000417407 739 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AC005189.1-201ENST00000431286 310 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 FCF1P1-201ENST00000432690 571 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AL138799.3-201ENST00000438968 350 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 CBX1P4-201ENST00000439415 457 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 VN1R48P-201ENST00000448149 1036 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 FDX1P2-201ENST00000450769 375 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 RPL5P13-201ENST00000462840 709 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 RPS27P29-201ENST00000463110 252 ntBASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCN10AQ9Y5Y9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 RNA5SP295-201ENST00000362655 121 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AL355379.1-201ENST00000405542 640 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 FTH1P1-201ENST00000437933 532 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 OR5D17P-201ENST00000531492 978 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AC022069.1-201ENST00000582910 658 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AC083760.1-201ENST00000589621 670 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 AC006065.5-201ENST00000623427 349 ntBASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCN10AQ9Y5Y9 RAD1P1-201ENST00000231383 813 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL590290.1-201ENST00000405336 380 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC021087.2-201ENST00000504656 1203 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 RNA5SP380-201ENST00000517190 98 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AP001180.3-201ENST00000582221 145 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AC010928.3-201ENST00000587712 541 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 FAM60CP-201ENST00000591086 664 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 U6.98-201ENST00000637157 84 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 RNVU1-3-201ENST00000364313 161 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 MIR153-1-201ENST00000384914 90 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL359511.1-201ENST00000402970 211 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 BTF3P7-201ENST00000407097 488 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 Z99127.2-201ENST00000441426 334 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 NPM1P49-201ENST00000448027 714 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 snoU13.26-201ENST00000459452 105 ntBASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN10AQ9Y5Y9 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms