Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC105148.1-201ENST00000604961 409 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC055876.5-201ENST00000605667 259 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC024257.5-201ENST00000612739 531 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC231759.1-201ENST00000616455 597 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC018816.2-201ENST00000621460 353 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC103858.2-201ENST00000621471 543 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CYP3A51P-201ENST00000633513 256 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 ZNF29P-201ENST00000225587 168 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 MIR199A2-201ENST00000385289 110 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA3C-201ENST00000408792 125 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC099677.1-201ENST00000420575 175 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC007435.1-201ENST00000421086 415 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 ELOCP8-201ENST00000439309 332 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 ELOCP15-201ENST00000442090 332 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 SETD6P1-201ENST00000444575 317 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 CYCSP35-201ENST00000451978 304 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 HMGN2P16-201ENST00000456802 261 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010285.1-201ENST00000470580 392 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC134050.1-201ENST00000495088 933 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA31.20-201ENST00000517111 133 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC087808.1-201ENST00000520501 361 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC037471.2-201ENST00000564941 598 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC015688.2-201ENST00000584523 262 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 MTCO2P2-201ENST00000591258 225 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC069545.1-201ENST00000605671 358 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC064801.1-201ENST00000612025 407 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC073530.2-201ENST00000623987 261 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AC091152.2-201ENST00000591628 2569 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA1Q9Y5H4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA1Q9Y5H4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA1Q9Y5H4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
PCDHGA1Q9Y5H4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
PCDHGA1Q9Y5H4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.71□□□□□ -1.81
PCDHGA1Q9Y5H4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RNA5SP295-201ENST00000362655 121 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 SNORD3H-201ENST00000384486 214 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU6-878P-201ENST00000384578 110 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RNVU1-14-201ENST00000384770 164 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AL138878.1-201ENST00000405131 347 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RNU4-22P-201ENST00000411058 166 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 Z92545.1-201ENST00000411782 234 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 JKAMPP1-201ENST00000413804 919 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 LUZP4P1-201ENST00000415420 344 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC245052.5-201ENST00000416320 649 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RPS3AP37-201ENST00000419176 745 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 NANOGP5-201ENST00000424456 877 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RPL7P44-201ENST00000424827 742 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 USP12PY-201ENST00000427677 1064 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 USP9YP24-201ENST00000434374 697 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 USP9YP17-201ENST00000444617 696 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 MTCYBP11-201ENST00000447254 1109 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 RPS3AP46-201ENST00000448352 682 ntBASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA1Q9Y5H4 ZNF886P-201ENST00000450781 723 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms