Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL30P3-201ENST00000424262 333 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AL161722.2-201ENST00000434731 981 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 RPL21P103-201ENST00000479921 488 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC083795.1-201ENST00000491760 320 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SL101P-201ENST00000496350 279 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC113367.2-201ENST00000505749 160 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC097486.1-201ENST00000515331 210 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 Y_RNA.668-201ENST00000516233 93 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-390P-201ENST00000516259 103 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AL355297.3-201ENST00000604082 446 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AL161423.1-201ENST00000613700 262 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC006484.1-201ENST00000435086 1884 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AC074029.4-201ENST00000624796 1859 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 THAP12P9-201ENST00000503971 2360 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL359893.1-201ENST00000447628 1580 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP250-201ENST00000363924 321 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-26P-201ENST00000383985 107 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-190P-201ENST00000384154 102 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL356968.1-201ENST00000416622 474 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 THEM7P-201ENST00000419556 672 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 USP9YP30-201ENST00000430729 455 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL645568.3-201ENST00000433683 316 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC016027.4-201ENST00000450866 277 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SL836P-201ENST00000476140 296 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC068781.1-201ENST00000488231 618 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 Y_RNA.689-201ENST00000516589 107 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-677P-201ENST00000516914 101 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC090151.1-201ENST00000520784 730 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 TRIM77BP-201ENST00000524985 1119 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC104763.2-201ENST00000604179 382 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL034351.1-201ENST00000605288 668 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR6130-201ENST00000619419 109 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR6813-201ENST00000621638 56 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR4496-201ENST00000635896 61 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC099654.15-201ENST00000639802 509 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL596275.2-204ENST00000641628 552 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL596275.2-206ENST00000641957 626 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 AC091812.1-201ENST00000432235 1948 ntBASIC5.82□□□□□ -1.48
PCDHGA11Q9Y5H2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 OR52B3P-201ENST00000314715 928 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 OR10R3P-201ENST00000361688 942 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU1-134P-201ENST00000362935 165 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 Y_RNA.307-201ENST00000365022 117 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP81-201ENST00000365603 331 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RHOT1P2-201ENST00000366423 333 ntBASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-823P-201ENST00000391042 103 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms